Gene : Seita.9G064800 S. italica v2.2
Defline:  (1 of 2) PTHR15835:SF6 - F20D23.9 PROTEIN Genomic Order:  648
Name:  ? Seita.9G064800 Secondary Identifier:  ? PAC:32686857
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G064800 0.5kb upstream 0.5kb upstream 7919 true scaffold_9: 3757775-3765693 Setaria italica
Seita.9G064800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3757775-3758274 Setaria italica
Seita.9G064800 0.5kb downstream 0.5kb downstream 7919 true scaffold_9: 3758275-3766193 Setaria italica
Seita.9G064800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3765694-3766193 Setaria italica
Seita.9G064800 1.0kb upstream 1.0kb upstream 8419 true scaffold_9: 3757275-3765693 Setaria italica
Seita.9G064800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3757275-3758274 Setaria italica
Seita.9G064800 1.0kb downstream 1.0kb downstream 8419 true scaffold_9: 3758275-3766693 Setaria italica
Seita.9G064800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3765694-3766693 Setaria italica
Seita.9G064800 2.0kb upstream 2.0kb upstream 9419 true scaffold_9: 3756275-3765693 Setaria italica
Seita.9G064800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3756275-3758274 Setaria italica
Seita.9G064800 2.0kb downstream 2.0kb downstream 9419 true scaffold_9: 3758275-3767693 Setaria italica
Seita.9G064800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3765694-3767693 Setaria italica
Seita.9G064800 5.0kb upstream 5.0kb upstream 12419 true scaffold_9: 3753275-3765693 Setaria italica
Seita.9G064800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3753275-3758274 Setaria italica
Seita.9G064800 5.0kb downstream 5.0kb downstream 12419 true scaffold_9: 3758275-3770693 Setaria italica
Seita.9G064800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3765694-3770693 Setaria italica
Seita.9G064800 10.0kb upstream 10.0kb upstream 17419 true scaffold_9: 3748275-3765693 Setaria italica
Seita.9G064800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3748275-3758274 Setaria italica
Seita.9G064800 10.0kb downstream 10.0kb downstream 17419 true scaffold_9: 3758275-3775693 Setaria italica
Seita.9G064800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3765694-3775693 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178549 5267 Panicoideae View MSA
124578089 5269 Grass View MSA
122045588 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.647     High  
cufflinks 21.99     High  
cufflinks 29.479     High High
cufflinks 26.865     High High
cufflinks 24.564     High  
cufflinks 23.864     High  
cufflinks 19.864     High  
cufflinks 18.687     High  
cufflinks 18.046     High  
cufflinks 6.848       Low
cufflinks 13.683     High Low
cufflinks 21.518     High  
cufflinks 16.229     High  
cufflinks 17.272     High  
cufflinks 24.246     High  
cufflinks 22.27     High  
cufflinks 21.896     High  
cufflinks 21.861     High  
cufflinks 20.122     High  
cufflinks 18.896     High  

0 Strain