Gene : Seita.9G068700 S. italica v2.2
Defline:  (1 of 4) 1.1.1.205 - IMP dehydrogenase / Inosinic acid dehydrogenase Genomic Order:  687
Name:  ? Seita.9G068700 Secondary Identifier:  ? PAC:32691166
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-5695 Setaria italica pathologic  
Sitalica PWY-6596 Setaria italica pathologic  
Sitalica PWY-7221 Setaria italica pathologic  
Sitalica PWY-7228 Setaria italica pathologic  
Sitalica PWY-841 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G068700 0.5kb upstream 0.5kb upstream 5005 true scaffold_9: 3988675-3993679 Setaria italica
Seita.9G068700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3993180-3993679 Setaria italica
Seita.9G068700 0.5kb downstream 0.5kb downstream 5005 true scaffold_9: 3988175-3993179 Setaria italica
Seita.9G068700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3988175-3988674 Setaria italica
Seita.9G068700 1.0kb upstream 1.0kb upstream 5505 true scaffold_9: 3988675-3994179 Setaria italica
Seita.9G068700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3993180-3994179 Setaria italica
Seita.9G068700 1.0kb downstream 1.0kb downstream 5505 true scaffold_9: 3987675-3993179 Setaria italica
Seita.9G068700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3987675-3988674 Setaria italica
Seita.9G068700 2.0kb upstream 2.0kb upstream 6505 true scaffold_9: 3988675-3995179 Setaria italica
Seita.9G068700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3993180-3995179 Setaria italica
Seita.9G068700 2.0kb downstream 2.0kb downstream 6505 true scaffold_9: 3986675-3993179 Setaria italica
Seita.9G068700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3986675-3988674 Setaria italica
Seita.9G068700 5.0kb upstream 5.0kb upstream 9505 true scaffold_9: 3988675-3998179 Setaria italica
Seita.9G068700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3993180-3998179 Setaria italica
Seita.9G068700 5.0kb downstream 5.0kb downstream 9505 true scaffold_9: 3983675-3993179 Setaria italica
Seita.9G068700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3983675-3988674 Setaria italica
Seita.9G068700 10.0kb upstream 10.0kb upstream 14505 true scaffold_9: 3988675-4003179 Setaria italica
Seita.9G068700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3993180-4003179 Setaria italica
Seita.9G068700 10.0kb downstream 10.0kb downstream 14505 true scaffold_9: 3978675-3993179 Setaria italica
Seita.9G068700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3978675-3988674 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192238 5267 Panicoideae View MSA
124577772 5269 Grass View MSA
122042253 5273 Angiosperm View MSA
121346920 5274 Embryophyte View MSA
123424189 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.667     High  
cufflinks 10.058       Low
cufflinks 15.481     High  
cufflinks 11.082     High  
cufflinks 13.049     High  
cufflinks 11.185        
cufflinks 10.347       Low
cufflinks 17.163     High High
cufflinks 14.997     High  
cufflinks 14.579        
cufflinks 17.087     High High
cufflinks 14.087     High  
cufflinks 11.03        
cufflinks 19.64     High High
cufflinks 14.221     High  
cufflinks 7.728       Low
cufflinks 18.186     High High
cufflinks 12.397     High  
cufflinks 12.787     High  
cufflinks 16.407     High  

0 Strain