Gene : Seita.9G073300 S. italica v2.2
Defline:  (1 of 1) PTHR24115:SF478 - KINESIN-LIKE PROTEIN Genomic Order:  733
Name:  ? Seita.9G073300 Secondary Identifier:  ? PAC:32690765
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G073300 0.5kb upstream 0.5kb upstream 8042 true scaffold_9: 4303146-4311187 Setaria italica
Seita.9G073300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4310688-4311187 Setaria italica
Seita.9G073300 0.5kb downstream 0.5kb downstream 8042 true scaffold_9: 4302646-4310687 Setaria italica
Seita.9G073300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4302646-4303145 Setaria italica
Seita.9G073300 1.0kb upstream 1.0kb upstream 8542 true scaffold_9: 4303146-4311687 Setaria italica
Seita.9G073300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4310688-4311687 Setaria italica
Seita.9G073300 1.0kb downstream 1.0kb downstream 8542 true scaffold_9: 4302146-4310687 Setaria italica
Seita.9G073300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4302146-4303145 Setaria italica
Seita.9G073300 2.0kb upstream 2.0kb upstream 9542 true scaffold_9: 4303146-4312687 Setaria italica
Seita.9G073300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4310688-4312687 Setaria italica
Seita.9G073300 2.0kb downstream 2.0kb downstream 9542 true scaffold_9: 4301146-4310687 Setaria italica
Seita.9G073300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4301146-4303145 Setaria italica
Seita.9G073300 5.0kb upstream 5.0kb upstream 12542 true scaffold_9: 4303146-4315687 Setaria italica
Seita.9G073300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4310688-4315687 Setaria italica
Seita.9G073300 5.0kb downstream 5.0kb downstream 12542 true scaffold_9: 4298146-4310687 Setaria italica
Seita.9G073300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4298146-4303145 Setaria italica
Seita.9G073300 10.0kb upstream 10.0kb upstream 17542 true scaffold_9: 4303146-4320687 Setaria italica
Seita.9G073300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4310688-4320687 Setaria italica
Seita.9G073300 10.0kb downstream 10.0kb downstream 17542 true scaffold_9: 4293146-4310687 Setaria italica
Seita.9G073300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4293146-4303145 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198266 5267 Panicoideae View MSA
124569619 5269 Grass View MSA
122044621 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350608 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.239        
cufflinks 10.578       High
cufflinks 0.571       Low
cufflinks 0.982        
cufflinks 1.337        
cufflinks 8.86       High
cufflinks 6.281       High
cufflinks 3.226        
cufflinks 4.182        
cufflinks 2.042        
cufflinks 3.217        
cufflinks 0.837        
cufflinks 1.863        
cufflinks 0.419       Low
cufflinks 1.51        
cufflinks 1.883        
cufflinks 1.31        
cufflinks 0.518       Low
cufflinks 0.433       Low
cufflinks 1.454        

0 Strain