Gene : Seita.9G074800 S. italica v2.2
Defline:  (1 of 2) PTHR10641:SF654 - TRANSCRIPTION FACTOR RAX1-RELATED Genomic Order:  748
Name:  ? Seita.9G074800 Secondary Identifier:  ? PAC:32687259
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G074800 0.5kb upstream 0.5kb upstream 1974 true scaffold_9: 4381705-4383678 Setaria italica
Seita.9G074800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4381705-4382204 Setaria italica
Seita.9G074800 0.5kb downstream 0.5kb downstream 1974 true scaffold_9: 4382205-4384178 Setaria italica
Seita.9G074800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4383679-4384178 Setaria italica
Seita.9G074800 1.0kb upstream 1.0kb upstream 2474 true scaffold_9: 4381205-4383678 Setaria italica
Seita.9G074800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4381205-4382204 Setaria italica
Seita.9G074800 1.0kb downstream 1.0kb downstream 2474 true scaffold_9: 4382205-4384678 Setaria italica
Seita.9G074800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4383679-4384678 Setaria italica
Seita.9G074800 2.0kb upstream 2.0kb upstream 3474 true scaffold_9: 4380205-4383678 Setaria italica
Seita.9G074800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4380205-4382204 Setaria italica
Seita.9G074800 2.0kb downstream 2.0kb downstream 3474 true scaffold_9: 4382205-4385678 Setaria italica
Seita.9G074800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4383679-4385678 Setaria italica
Seita.9G074800 5.0kb upstream 5.0kb upstream 6474 true scaffold_9: 4377205-4383678 Setaria italica
Seita.9G074800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4377205-4382204 Setaria italica
Seita.9G074800 5.0kb downstream 5.0kb downstream 6474 true scaffold_9: 4382205-4388678 Setaria italica
Seita.9G074800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4383679-4388678 Setaria italica
Seita.9G074800 10.0kb upstream 10.0kb upstream 11474 true scaffold_9: 4372205-4383678 Setaria italica
Seita.9G074800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4372205-4382204 Setaria italica
Seita.9G074800 10.0kb downstream 10.0kb downstream 11474 true scaffold_9: 4382205-4393678 Setaria italica
Seita.9G074800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4383679-4393678 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197396 5267 Panicoideae View MSA
124589911 5269 Grass View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.427        
cufflinks 0.073     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098     Low  
cufflinks 0.202        
cufflinks 0.409        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.05        
cufflinks 5.027        
cufflinks 7.883        
cufflinks 11.294        
cufflinks 0.016     Low Low
cufflinks 19.324     High High
cufflinks 0.136        
cufflinks 15.497     High High
cufflinks 0.119        
cufflinks 0.013     Low Low
cufflinks 16.086     High High

0 Strain