Gene : Seita.9G013200 S. italica v2.2
Defline:  (1 of 2) PTHR10917 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 Genomic Order:  132
Name:  ? Seita.9G013200 Secondary Identifier:  ? PAC:32692853
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G013200 0.5kb upstream 0.5kb upstream 3593 true scaffold_9: 694401-697993 Setaria italica
Seita.9G013200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 694401-694900 Setaria italica
Seita.9G013200 0.5kb downstream 0.5kb downstream 3593 true scaffold_9: 694901-698493 Setaria italica
Seita.9G013200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 697994-698493 Setaria italica
Seita.9G013200 1.0kb upstream 1.0kb upstream 4093 true scaffold_9: 693901-697993 Setaria italica
Seita.9G013200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 693901-694900 Setaria italica
Seita.9G013200 1.0kb downstream 1.0kb downstream 4093 true scaffold_9: 694901-698993 Setaria italica
Seita.9G013200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 697994-698993 Setaria italica
Seita.9G013200 2.0kb upstream 2.0kb upstream 5093 true scaffold_9: 692901-697993 Setaria italica
Seita.9G013200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 692901-694900 Setaria italica
Seita.9G013200 2.0kb downstream 2.0kb downstream 5093 true scaffold_9: 694901-699993 Setaria italica
Seita.9G013200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 697994-699993 Setaria italica
Seita.9G013200 5.0kb upstream 5.0kb upstream 8093 true scaffold_9: 689901-697993 Setaria italica
Seita.9G013200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 689901-694900 Setaria italica
Seita.9G013200 5.0kb downstream 5.0kb downstream 8093 true scaffold_9: 694901-702993 Setaria italica
Seita.9G013200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 697994-702993 Setaria italica
Seita.9G013200 10.0kb upstream 10.0kb upstream 13093 true scaffold_9: 684901-697993 Setaria italica
Seita.9G013200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 684901-694900 Setaria italica
Seita.9G013200 10.0kb downstream 10.0kb downstream 13093 true scaffold_9: 694901-707993 Setaria italica
Seita.9G013200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 697994-707993 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122116738 5267 Panicoideae View MSA
124411152 5269 Grass View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low  
cufflinks 0.057     Low High
cufflinks 0.02     Low  
cufflinks 0.008     Low  
cufflinks 0.012     Low  
cufflinks 0.219       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.011     Low  
cufflinks 0.022     Low  
cufflinks 0.017     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  

0 Strain