Gene : Seita.9G027800 S. italica v2.2
Defline:  (1 of 1) PTHR31956:SF9 - NON-SPECIFIC PHOSPHOLIPASE C1 Genomic Order:  278
Name:  ? Seita.9G027800 Secondary Identifier:  ? PAC:32688068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G027800 0.5kb upstream 0.5kb upstream 3643 true scaffold_9: 1518394-1522036 Setaria italica
Seita.9G027800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1521537-1522036 Setaria italica
Seita.9G027800 0.5kb downstream 0.5kb downstream 3643 true scaffold_9: 1517894-1521536 Setaria italica
Seita.9G027800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1517894-1518393 Setaria italica
Seita.9G027800 1.0kb upstream 1.0kb upstream 4143 true scaffold_9: 1518394-1522536 Setaria italica
Seita.9G027800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1521537-1522536 Setaria italica
Seita.9G027800 1.0kb downstream 1.0kb downstream 4143 true scaffold_9: 1517394-1521536 Setaria italica
Seita.9G027800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1517394-1518393 Setaria italica
Seita.9G027800 2.0kb upstream 2.0kb upstream 5143 true scaffold_9: 1518394-1523536 Setaria italica
Seita.9G027800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1521537-1523536 Setaria italica
Seita.9G027800 2.0kb downstream 2.0kb downstream 5143 true scaffold_9: 1516394-1521536 Setaria italica
Seita.9G027800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1516394-1518393 Setaria italica
Seita.9G027800 5.0kb upstream 5.0kb upstream 8143 true scaffold_9: 1518394-1526536 Setaria italica
Seita.9G027800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1521537-1526536 Setaria italica
Seita.9G027800 5.0kb downstream 5.0kb downstream 8143 true scaffold_9: 1513394-1521536 Setaria italica
Seita.9G027800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1513394-1518393 Setaria italica
Seita.9G027800 10.0kb upstream 10.0kb upstream 13143 true scaffold_9: 1518394-1531536 Setaria italica
Seita.9G027800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1521537-1531536 Setaria italica
Seita.9G027800 10.0kb downstream 10.0kb downstream 13143 true scaffold_9: 1508394-1521536 Setaria italica
Seita.9G027800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1508394-1518393 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180569 5267 Panicoideae View MSA
124574867 5269 Grass View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.186     High  
cufflinks 83.351     High  
cufflinks 166.318     High High
cufflinks 132.704     High  
cufflinks 90.192     High  
cufflinks 90.734     High  
cufflinks 48.129     High Low
cufflinks 63.667     High  
cufflinks 45.397     High Low
cufflinks 79.77     High  
cufflinks 93.668     High  
cufflinks 265.836     High High
cufflinks 150.757     High  
cufflinks 114.122     High  
cufflinks 105.61     High  
cufflinks 54.105     High Low
cufflinks 158.126     High  
cufflinks 74.723     High  
cufflinks 101.568     High  
cufflinks 210.198     High High

0 Strain