Gene : Seita.9G027500 S. italica v2.2
Genomic Order:  275 Name:  ? Seita.9G027500
Secondary Identifier:  ? PAC:32693388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G027500 0.5kb upstream 0.5kb upstream 1444 true scaffold_9: 1502574-1504017 Setaria italica
Seita.9G027500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1502574-1503073 Setaria italica
Seita.9G027500 0.5kb downstream 0.5kb downstream 1444 true scaffold_9: 1503074-1504517 Setaria italica
Seita.9G027500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1504018-1504517 Setaria italica
Seita.9G027500 1.0kb upstream 1.0kb upstream 1944 true scaffold_9: 1502074-1504017 Setaria italica
Seita.9G027500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1502074-1503073 Setaria italica
Seita.9G027500 1.0kb downstream 1.0kb downstream 1944 true scaffold_9: 1503074-1505017 Setaria italica
Seita.9G027500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1504018-1505017 Setaria italica
Seita.9G027500 2.0kb upstream 2.0kb upstream 2944 true scaffold_9: 1501074-1504017 Setaria italica
Seita.9G027500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1501074-1503073 Setaria italica
Seita.9G027500 2.0kb downstream 2.0kb downstream 2944 true scaffold_9: 1503074-1506017 Setaria italica
Seita.9G027500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1504018-1506017 Setaria italica
Seita.9G027500 5.0kb upstream 5.0kb upstream 5944 true scaffold_9: 1498074-1504017 Setaria italica
Seita.9G027500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1498074-1503073 Setaria italica
Seita.9G027500 5.0kb downstream 5.0kb downstream 5944 true scaffold_9: 1503074-1509017 Setaria italica
Seita.9G027500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1504018-1509017 Setaria italica
Seita.9G027500 10.0kb upstream 10.0kb upstream 10944 true scaffold_9: 1493074-1504017 Setaria italica
Seita.9G027500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1493074-1503073 Setaria italica
Seita.9G027500 10.0kb downstream 10.0kb downstream 10944 true scaffold_9: 1503074-1514017 Setaria italica
Seita.9G027500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1504018-1514017 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194643 5267 Panicoideae View MSA
124587108 5269 Grass View MSA
122047280 5273 Angiosperm View MSA
121349070 5274 Embryophyte View MSA
123381150 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.373        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.629       High
cufflinks 0.563        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.017     Low Low
cufflinks 0.576        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain