Gene : Seita.9G132200 S. italica v2.2
Defline:  (1 of 7) PF06136 - Domain of unknown function (DUF966) (DUF966) Genomic Order:  1322
Name:  ? Seita.9G132200 Secondary Identifier:  ? PAC:32690314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G132200 0.5kb upstream 0.5kb upstream 5373 true scaffold_9: 8315583-8320955 Setaria italica
Seita.9G132200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 8315583-8316082 Setaria italica
Seita.9G132200 0.5kb downstream 0.5kb downstream 5373 true scaffold_9: 8316083-8321455 Setaria italica
Seita.9G132200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 8320956-8321455 Setaria italica
Seita.9G132200 1.0kb upstream 1.0kb upstream 5873 true scaffold_9: 8315083-8320955 Setaria italica
Seita.9G132200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 8315083-8316082 Setaria italica
Seita.9G132200 1.0kb downstream 1.0kb downstream 5873 true scaffold_9: 8316083-8321955 Setaria italica
Seita.9G132200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 8320956-8321955 Setaria italica
Seita.9G132200 2.0kb upstream 2.0kb upstream 6873 true scaffold_9: 8314083-8320955 Setaria italica
Seita.9G132200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 8314083-8316082 Setaria italica
Seita.9G132200 2.0kb downstream 2.0kb downstream 6873 true scaffold_9: 8316083-8322955 Setaria italica
Seita.9G132200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 8320956-8322955 Setaria italica
Seita.9G132200 5.0kb upstream 5.0kb upstream 9873 true scaffold_9: 8311083-8320955 Setaria italica
Seita.9G132200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 8311083-8316082 Setaria italica
Seita.9G132200 5.0kb downstream 5.0kb downstream 9873 true scaffold_9: 8316083-8325955 Setaria italica
Seita.9G132200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 8320956-8325955 Setaria italica
Seita.9G132200 10.0kb upstream 10.0kb upstream 14873 true scaffold_9: 8306083-8320955 Setaria italica
Seita.9G132200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 8306083-8316082 Setaria italica
Seita.9G132200 10.0kb downstream 10.0kb downstream 14873 true scaffold_9: 8316083-8330955 Setaria italica
Seita.9G132200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 8320956-8330955 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177522 5267 Panicoideae View MSA
124570434 5269 Grass View MSA
122050993 5273 Angiosperm View MSA
121349769 5274 Embryophyte View MSA
123381438 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.423        
cufflinks 4.925       High
cufflinks 0.754        
cufflinks 0.947        
cufflinks 1.081        
cufflinks 5.665       High
cufflinks 2.855       High
cufflinks 1.449        
cufflinks 1.518        
cufflinks 0.914        
cufflinks 1.136        
cufflinks 0.208       Low
cufflinks 0.54        
cufflinks 0.434        
cufflinks 0.359       Low
cufflinks 1.514        
cufflinks 0.3       Low
cufflinks 0.855        
cufflinks 0.786        
cufflinks 0.33       Low

0 Strain