Gene : Seita.9G141700 S. italica v2.2
Genomic Order:  1417 Name:  ? Seita.9G141700
Secondary Identifier:  ? PAC:32689968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G141700 0.5kb upstream 0.5kb upstream 1290 true scaffold_9: 9052831-9054120 Setaria italica
Seita.9G141700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 9053621-9054120 Setaria italica
Seita.9G141700 0.5kb downstream 0.5kb downstream 1290 true scaffold_9: 9052331-9053620 Setaria italica
Seita.9G141700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 9052331-9052830 Setaria italica
Seita.9G141700 1.0kb upstream 1.0kb upstream 1790 true scaffold_9: 9052831-9054620 Setaria italica
Seita.9G141700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 9053621-9054620 Setaria italica
Seita.9G141700 1.0kb downstream 1.0kb downstream 1790 true scaffold_9: 9051831-9053620 Setaria italica
Seita.9G141700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 9051831-9052830 Setaria italica
Seita.9G141700 2.0kb upstream 2.0kb upstream 2790 true scaffold_9: 9052831-9055620 Setaria italica
Seita.9G141700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 9053621-9055620 Setaria italica
Seita.9G141700 2.0kb downstream 2.0kb downstream 2790 true scaffold_9: 9050831-9053620 Setaria italica
Seita.9G141700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 9050831-9052830 Setaria italica
Seita.9G141700 5.0kb upstream 5.0kb upstream 5790 true scaffold_9: 9052831-9058620 Setaria italica
Seita.9G141700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 9053621-9058620 Setaria italica
Seita.9G141700 5.0kb downstream 5.0kb downstream 5790 true scaffold_9: 9047831-9053620 Setaria italica
Seita.9G141700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 9047831-9052830 Setaria italica
Seita.9G141700 10.0kb upstream 10.0kb upstream 10790 true scaffold_9: 9052831-9063620 Setaria italica
Seita.9G141700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 9053621-9063620 Setaria italica
Seita.9G141700 10.0kb downstream 10.0kb downstream 10790 true scaffold_9: 9042831-9053620 Setaria italica
Seita.9G141700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 9042831-9052830 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193178 5267 Panicoideae View MSA
124587243 5269 Grass View MSA
122049581 5273 Angiosperm View MSA
121311486 5274 Embryophyte View MSA
123348778 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low  
cufflinks 0.031     Low Low
cufflinks 0.093        
cufflinks 0.034     Low  
cufflinks 0.142        
cufflinks 0.112     Low  
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087     Low  
cufflinks 0.382       High
cufflinks 0.028     Low Low
cufflinks 0.103     Low  
cufflinks 0.171     Low High
cufflinks 0.06     Low  
cufflinks 0.062     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.075     Low  
cufflinks 0.108        
cufflinks 0.107     Low  

0 Strain