Gene : Seita.9G147000 S. italica v2.2
Genomic Order:  1470 Name:  ? Seita.9G147000
Secondary Identifier:  ? PAC:32688092
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G147000 0.5kb upstream 0.5kb upstream 4442 true scaffold_9: 9549447-9553888 Setaria italica
Seita.9G147000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 9553389-9553888 Setaria italica
Seita.9G147000 0.5kb downstream 0.5kb downstream 4442 true scaffold_9: 9548947-9553388 Setaria italica
Seita.9G147000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 9548947-9549446 Setaria italica
Seita.9G147000 1.0kb upstream 1.0kb upstream 4942 true scaffold_9: 9549447-9554388 Setaria italica
Seita.9G147000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 9553389-9554388 Setaria italica
Seita.9G147000 1.0kb downstream 1.0kb downstream 4942 true scaffold_9: 9548447-9553388 Setaria italica
Seita.9G147000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 9548447-9549446 Setaria italica
Seita.9G147000 2.0kb upstream 2.0kb upstream 5942 true scaffold_9: 9549447-9555388 Setaria italica
Seita.9G147000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 9553389-9555388 Setaria italica
Seita.9G147000 2.0kb downstream 2.0kb downstream 5942 true scaffold_9: 9547447-9553388 Setaria italica
Seita.9G147000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 9547447-9549446 Setaria italica
Seita.9G147000 5.0kb upstream 5.0kb upstream 8942 true scaffold_9: 9549447-9558388 Setaria italica
Seita.9G147000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 9553389-9558388 Setaria italica
Seita.9G147000 5.0kb downstream 5.0kb downstream 8942 true scaffold_9: 9544447-9553388 Setaria italica
Seita.9G147000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 9544447-9549446 Setaria italica
Seita.9G147000 10.0kb upstream 10.0kb upstream 13942 true scaffold_9: 9549447-9563388 Setaria italica
Seita.9G147000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 9553389-9563388 Setaria italica
Seita.9G147000 10.0kb downstream 10.0kb downstream 13942 true scaffold_9: 9539447-9553388 Setaria italica
Seita.9G147000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 9539447-9549446 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026471 5273 Angiosperm View MSA
122198814 5267 Panicoideae View MSA
124578271 5269 Grass View MSA
121344910 5274 Embryophyte View MSA
123380127 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.168        
cufflinks 2.994        
cufflinks 1.509       Low
cufflinks 1.256       Low
cufflinks 1.331       Low
cufflinks 3.315        
cufflinks 1.839        
cufflinks 3.619        
cufflinks 2.565        
cufflinks 4.495       High
cufflinks 2.522        
cufflinks 4.589       High
cufflinks 3.417        
cufflinks 1.936        
cufflinks 3.23        
cufflinks 1.864        
cufflinks 5.726       High
cufflinks 1.792        
cufflinks 1.228       Low
cufflinks 4.552       High

0 Strain