Gene : Seita.9G154600 S. italica v2.2
Defline:  (1 of 1) 3.1.3.91 - 7-methylguanosine nucleotidase / N(7)-methylguanylate 5'-phosphatase Genomic Order:  1546
Name:  ? Seita.9G154600 Secondary Identifier:  ? PAC:32691684
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-5381 Setaria italica pathologic  
Sitalica PWY-5695 Setaria italica pathologic  
Sitalica PWY-6596 Setaria italica pathologic  
Sitalica PWY-6606 Setaria italica pathologic  
Sitalica PWY-6608 Setaria italica pathologic  
Sitalica PWY-7185 Setaria italica pathologic  
Sitalica SALVADEHYPOX-PWY Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G154600 0.5kb upstream 0.5kb upstream 4394 true scaffold_9: 10128095-10132488 Setaria italica
Seita.9G154600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 10131989-10132488 Setaria italica
Seita.9G154600 0.5kb downstream 0.5kb downstream 4394 true scaffold_9: 10127595-10131988 Setaria italica
Seita.9G154600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 10127595-10128094 Setaria italica
Seita.9G154600 1.0kb upstream 1.0kb upstream 4894 true scaffold_9: 10128095-10132988 Setaria italica
Seita.9G154600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 10131989-10132988 Setaria italica
Seita.9G154600 1.0kb downstream 1.0kb downstream 4894 true scaffold_9: 10127095-10131988 Setaria italica
Seita.9G154600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 10127095-10128094 Setaria italica
Seita.9G154600 2.0kb upstream 2.0kb upstream 5894 true scaffold_9: 10128095-10133988 Setaria italica
Seita.9G154600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 10131989-10133988 Setaria italica
Seita.9G154600 2.0kb downstream 2.0kb downstream 5894 true scaffold_9: 10126095-10131988 Setaria italica
Seita.9G154600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 10126095-10128094 Setaria italica
Seita.9G154600 5.0kb upstream 5.0kb upstream 8894 true scaffold_9: 10128095-10136988 Setaria italica
Seita.9G154600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 10131989-10136988 Setaria italica
Seita.9G154600 5.0kb downstream 5.0kb downstream 8894 true scaffold_9: 10123095-10131988 Setaria italica
Seita.9G154600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 10123095-10128094 Setaria italica
Seita.9G154600 10.0kb upstream 10.0kb upstream 13894 true scaffold_9: 10128095-10141988 Setaria italica
Seita.9G154600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 10131989-10141988 Setaria italica
Seita.9G154600 10.0kb downstream 10.0kb downstream 13894 true scaffold_9: 10118095-10131988 Setaria italica
Seita.9G154600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 10118095-10128094 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188644 5267 Panicoideae View MSA
124579936 5269 Grass View MSA
122047014 5273 Angiosperm View MSA
121348169 5274 Embryophyte View MSA
123380756 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.837        
cufflinks 4.027        
cufflinks 4.857       High
cufflinks 4.672        
cufflinks 4.424        
cufflinks 3.844        
cufflinks 4.598        
cufflinks 4.851       High
cufflinks 4.723        
cufflinks 4.52        
cufflinks 2.954        
cufflinks 2.654       Low
cufflinks 2.009       Low
cufflinks 4.345        
cufflinks 2.798        
cufflinks 4.32        
cufflinks 2.799        
cufflinks 3.526        
cufflinks 3.622        
cufflinks 2.184       Low

0 Strain