Gene : Seita.9G096500 S. italica v2.2
Defline:  (1 of 1) PTHR11772:SF8 - ALUMINIUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS-RELATED Genomic Order:  965
Name:  ? Seita.9G096500 Secondary Identifier:  ? PAC:32692915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G096500 0.5kb upstream 0.5kb upstream 3944 true scaffold_9: 5805023-5808966 Setaria italica
Seita.9G096500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5805023-5805522 Setaria italica
Seita.9G096500 0.5kb downstream 0.5kb downstream 3944 true scaffold_9: 5805523-5809466 Setaria italica
Seita.9G096500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5808967-5809466 Setaria italica
Seita.9G096500 1.0kb upstream 1.0kb upstream 4444 true scaffold_9: 5804523-5808966 Setaria italica
Seita.9G096500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5804523-5805522 Setaria italica
Seita.9G096500 1.0kb downstream 1.0kb downstream 4444 true scaffold_9: 5805523-5809966 Setaria italica
Seita.9G096500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5808967-5809966 Setaria italica
Seita.9G096500 2.0kb upstream 2.0kb upstream 5444 true scaffold_9: 5803523-5808966 Setaria italica
Seita.9G096500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5803523-5805522 Setaria italica
Seita.9G096500 2.0kb downstream 2.0kb downstream 5444 true scaffold_9: 5805523-5810966 Setaria italica
Seita.9G096500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5808967-5810966 Setaria italica
Seita.9G096500 5.0kb upstream 5.0kb upstream 8444 true scaffold_9: 5800523-5808966 Setaria italica
Seita.9G096500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5800523-5805522 Setaria italica
Seita.9G096500 5.0kb downstream 5.0kb downstream 8444 true scaffold_9: 5805523-5813966 Setaria italica
Seita.9G096500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5808967-5813966 Setaria italica
Seita.9G096500 10.0kb upstream 10.0kb upstream 13444 true scaffold_9: 5795523-5808966 Setaria italica
Seita.9G096500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5795523-5805522 Setaria italica
Seita.9G096500 10.0kb downstream 10.0kb downstream 13444 true scaffold_9: 5805523-5818966 Setaria italica
Seita.9G096500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5808967-5818966 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190615 5267 Panicoideae View MSA
124572860 5269 Grass View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.226     High Low
cufflinks 22.147     High Low
cufflinks 44.072     High  
cufflinks 88.007     High High
cufflinks 75.689     High High
cufflinks 26.947     High  
cufflinks 28.544     High  
cufflinks 43.396     High  
cufflinks 45.784     High  
cufflinks 33.365     High  
cufflinks 19.789     High Low
cufflinks 114.066     High High
cufflinks 78.889     High High
cufflinks 29.685     High  
cufflinks 19.991     High Low
cufflinks 30.49     High  
cufflinks 64.112     High  
cufflinks 62.292     High  
cufflinks 46.02     High  
cufflinks 50.488     High  

0 Strain