Gene : Seita.9G219200 S. italica v2.2
Genomic Order:  2192 Name:  ? Seita.9G219200
Secondary Identifier:  ? PAC:32688272
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G219200 0.5kb upstream 0.5kb upstream 2915 true scaffold_9: 16117124-16120038 Setaria italica
Seita.9G219200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 16117124-16117623 Setaria italica
Seita.9G219200 0.5kb downstream 0.5kb downstream 2915 true scaffold_9: 16117624-16120538 Setaria italica
Seita.9G219200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 16120039-16120538 Setaria italica
Seita.9G219200 1.0kb upstream 1.0kb upstream 3415 true scaffold_9: 16116624-16120038 Setaria italica
Seita.9G219200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 16116624-16117623 Setaria italica
Seita.9G219200 1.0kb downstream 1.0kb downstream 3415 true scaffold_9: 16117624-16121038 Setaria italica
Seita.9G219200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 16120039-16121038 Setaria italica
Seita.9G219200 2.0kb upstream 2.0kb upstream 4415 true scaffold_9: 16115624-16120038 Setaria italica
Seita.9G219200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 16115624-16117623 Setaria italica
Seita.9G219200 2.0kb downstream 2.0kb downstream 4415 true scaffold_9: 16117624-16122038 Setaria italica
Seita.9G219200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 16120039-16122038 Setaria italica
Seita.9G219200 5.0kb upstream 5.0kb upstream 7415 true scaffold_9: 16112624-16120038 Setaria italica
Seita.9G219200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 16112624-16117623 Setaria italica
Seita.9G219200 5.0kb downstream 5.0kb downstream 7415 true scaffold_9: 16117624-16125038 Setaria italica
Seita.9G219200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 16120039-16125038 Setaria italica
Seita.9G219200 10.0kb upstream 10.0kb upstream 12415 true scaffold_9: 16107624-16120038 Setaria italica
Seita.9G219200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 16107624-16117623 Setaria italica
Seita.9G219200 10.0kb downstream 10.0kb downstream 12415 true scaffold_9: 16117624-16130038 Setaria italica
Seita.9G219200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 16120039-16130038 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027321 5273 Angiosperm View MSA
122191589 5267 Panicoideae View MSA
124581154 5269 Grass View MSA
121348410 5274 Embryophyte View MSA
123427481 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.547        
cufflinks 8.834        
cufflinks 3.946       Low
cufflinks 5.142        
cufflinks 4.723        
cufflinks 8.572        
cufflinks 5.372        
cufflinks 10.12        
cufflinks 5.687        
cufflinks 18.221     High High
cufflinks 6.957        
cufflinks 7.491        
cufflinks 10.779       High
cufflinks 5.725        
cufflinks 8.288        
cufflinks 4.521        
cufflinks 9.312        
cufflinks 3.222       Low
cufflinks 4.983        
cufflinks 10.18        

0 Strain