Gene : Seita.9G229800 S. italica v2.2
Defline:  (1 of 1) KOG0293 - WD40 repeat-containing protein Genomic Order:  2298
Name:  ? Seita.9G229800 Secondary Identifier:  ? PAC:32692116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G229800 0.5kb upstream 0.5kb upstream 7299 true scaffold_9: 17328753-17336051 Setaria italica
Seita.9G229800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 17328753-17329252 Setaria italica
Seita.9G229800 0.5kb downstream 0.5kb downstream 7299 true scaffold_9: 17329253-17336551 Setaria italica
Seita.9G229800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 17336052-17336551 Setaria italica
Seita.9G229800 1.0kb upstream 1.0kb upstream 7799 true scaffold_9: 17328253-17336051 Setaria italica
Seita.9G229800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 17328253-17329252 Setaria italica
Seita.9G229800 1.0kb downstream 1.0kb downstream 7799 true scaffold_9: 17329253-17337051 Setaria italica
Seita.9G229800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 17336052-17337051 Setaria italica
Seita.9G229800 2.0kb upstream 2.0kb upstream 8799 true scaffold_9: 17327253-17336051 Setaria italica
Seita.9G229800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 17327253-17329252 Setaria italica
Seita.9G229800 2.0kb downstream 2.0kb downstream 8799 true scaffold_9: 17329253-17338051 Setaria italica
Seita.9G229800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 17336052-17338051 Setaria italica
Seita.9G229800 5.0kb upstream 5.0kb upstream 11799 true scaffold_9: 17324253-17336051 Setaria italica
Seita.9G229800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 17324253-17329252 Setaria italica
Seita.9G229800 5.0kb downstream 5.0kb downstream 11799 true scaffold_9: 17329253-17341051 Setaria italica
Seita.9G229800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 17336052-17341051 Setaria italica
Seita.9G229800 10.0kb upstream 10.0kb upstream 16799 true scaffold_9: 17319253-17336051 Setaria italica
Seita.9G229800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 17319253-17329252 Setaria italica
Seita.9G229800 10.0kb downstream 10.0kb downstream 16799 true scaffold_9: 17329253-17346051 Setaria italica
Seita.9G229800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 17336052-17346051 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181043 5267 Panicoideae View MSA
124582723 5269 Grass View MSA
122043991 5273 Angiosperm View MSA
121310222 5274 Embryophyte View MSA
123426468 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.108        
cufflinks 2.089        
cufflinks 4.516       High
cufflinks 3.889       High
cufflinks 3.413        
cufflinks 1.96        
cufflinks 1.802        
cufflinks 2.025        
cufflinks 1.984        
cufflinks 1.462       Low
cufflinks 1.495       Low
cufflinks 4.362       High
cufflinks 1.739        
cufflinks 2.341        
cufflinks 1.489       Low
cufflinks 2.988        
cufflinks 2.554        
cufflinks 5.362       High
cufflinks 3.111        
cufflinks 2.812        

0 Strain