Gene : Seita.9G239600 S. italica v2.2
Defline:  (1 of 2) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D Genomic Order:  2396
Name:  ? Seita.9G239600 Secondary Identifier:  ? PAC:32689071
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G239600 0.5kb upstream 0.5kb upstream 4977 true scaffold_9: 18644767-18649743 Setaria italica
Seita.9G239600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 18649244-18649743 Setaria italica
Seita.9G239600 0.5kb downstream 0.5kb downstream 4977 true scaffold_9: 18644267-18649243 Setaria italica
Seita.9G239600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 18644267-18644766 Setaria italica
Seita.9G239600 1.0kb upstream 1.0kb upstream 5477 true scaffold_9: 18644767-18650243 Setaria italica
Seita.9G239600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 18649244-18650243 Setaria italica
Seita.9G239600 1.0kb downstream 1.0kb downstream 5477 true scaffold_9: 18643767-18649243 Setaria italica
Seita.9G239600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 18643767-18644766 Setaria italica
Seita.9G239600 2.0kb upstream 2.0kb upstream 6477 true scaffold_9: 18644767-18651243 Setaria italica
Seita.9G239600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 18649244-18651243 Setaria italica
Seita.9G239600 2.0kb downstream 2.0kb downstream 6477 true scaffold_9: 18642767-18649243 Setaria italica
Seita.9G239600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 18642767-18644766 Setaria italica
Seita.9G239600 5.0kb upstream 5.0kb upstream 9477 true scaffold_9: 18644767-18654243 Setaria italica
Seita.9G239600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 18649244-18654243 Setaria italica
Seita.9G239600 5.0kb downstream 5.0kb downstream 9477 true scaffold_9: 18639767-18649243 Setaria italica
Seita.9G239600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 18639767-18644766 Setaria italica
Seita.9G239600 10.0kb upstream 10.0kb upstream 14477 true scaffold_9: 18644767-18659243 Setaria italica
Seita.9G239600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 18649244-18659243 Setaria italica
Seita.9G239600 10.0kb downstream 10.0kb downstream 14477 true scaffold_9: 18634767-18649243 Setaria italica
Seita.9G239600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 18634767-18644766 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192103 5267 Panicoideae View MSA
124586539 5269 Grass View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 173.487     High  
cufflinks 189.629     High  
cufflinks 162.166     High  
cufflinks 139.76     High  
cufflinks 149.827     High  
cufflinks 176.385     High  
cufflinks 155.503     High  
cufflinks 139.975     High  
cufflinks 172.76     High  
cufflinks 129.797     High Low
cufflinks 206.511     High High
cufflinks 190.14     High  
cufflinks 189.806     High  
cufflinks 164.36     High  
cufflinks 234.638     High High
cufflinks 87.293     High Low
cufflinks 184.526     High  
cufflinks 164.894     High  
cufflinks 159.752     High  
cufflinks 204.146     High High

0 Strain