Gene : Seita.9G238000 S. italica v2.2
Defline:  (1 of 1) PTHR11937:SF257 - ACTIN-RELATED PROTEIN 7 Genomic Order:  2380
Name:  ? Seita.9G238000 Secondary Identifier:  ? PAC:32691998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G238000 0.5kb upstream 0.5kb upstream 6568 true scaffold_9: 18312630-18319197 Setaria italica
Seita.9G238000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 18312630-18313129 Setaria italica
Seita.9G238000 0.5kb downstream 0.5kb downstream 6568 true scaffold_9: 18313130-18319697 Setaria italica
Seita.9G238000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 18319198-18319697 Setaria italica
Seita.9G238000 1.0kb upstream 1.0kb upstream 7068 true scaffold_9: 18312130-18319197 Setaria italica
Seita.9G238000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 18312130-18313129 Setaria italica
Seita.9G238000 1.0kb downstream 1.0kb downstream 7068 true scaffold_9: 18313130-18320197 Setaria italica
Seita.9G238000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 18319198-18320197 Setaria italica
Seita.9G238000 2.0kb upstream 2.0kb upstream 8068 true scaffold_9: 18311130-18319197 Setaria italica
Seita.9G238000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 18311130-18313129 Setaria italica
Seita.9G238000 2.0kb downstream 2.0kb downstream 8068 true scaffold_9: 18313130-18321197 Setaria italica
Seita.9G238000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 18319198-18321197 Setaria italica
Seita.9G238000 5.0kb upstream 5.0kb upstream 11068 true scaffold_9: 18308130-18319197 Setaria italica
Seita.9G238000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 18308130-18313129 Setaria italica
Seita.9G238000 5.0kb downstream 5.0kb downstream 11068 true scaffold_9: 18313130-18324197 Setaria italica
Seita.9G238000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 18319198-18324197 Setaria italica
Seita.9G238000 10.0kb upstream 10.0kb upstream 16068 true scaffold_9: 18303130-18319197 Setaria italica
Seita.9G238000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 18303130-18313129 Setaria italica
Seita.9G238000 10.0kb downstream 10.0kb downstream 16068 true scaffold_9: 18313130-18329197 Setaria italica
Seita.9G238000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 18319198-18329197 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185322 5267 Panicoideae View MSA
124572056 5269 Grass View MSA
122047685 5273 Angiosperm View MSA
121343857 5274 Embryophyte View MSA
123428641 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.301        
cufflinks 2.777       High
cufflinks 1.046       Low
cufflinks 0.976       Low
cufflinks 0.836       Low
cufflinks 2.759       High
cufflinks 1.823        
cufflinks 2.034        
cufflinks 1.681        
cufflinks 2.403        
cufflinks 1.889        
cufflinks 2.033        
cufflinks 1.213        
cufflinks 1.441        
cufflinks 2.352        
cufflinks 1.47        
cufflinks 2.389        
cufflinks 1.576        
cufflinks 1.147       Low
cufflinks 2.48        

0 Strain