Gene : Seita.9G245900 S. italica v2.2
Genomic Order:  2459 Name:  ? Seita.9G245900
Secondary Identifier:  ? PAC:32686852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G245900 0.5kb upstream 0.5kb upstream 1563 true scaffold_9: 19187577-19189139 Setaria italica
Seita.9G245900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 19187577-19188076 Setaria italica
Seita.9G245900 0.5kb downstream 0.5kb downstream 1563 true scaffold_9: 19188077-19189639 Setaria italica
Seita.9G245900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 19189140-19189639 Setaria italica
Seita.9G245900 1.0kb upstream 1.0kb upstream 2063 true scaffold_9: 19187077-19189139 Setaria italica
Seita.9G245900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 19187077-19188076 Setaria italica
Seita.9G245900 1.0kb downstream 1.0kb downstream 2063 true scaffold_9: 19188077-19190139 Setaria italica
Seita.9G245900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 19189140-19190139 Setaria italica
Seita.9G245900 2.0kb upstream 2.0kb upstream 3063 true scaffold_9: 19186077-19189139 Setaria italica
Seita.9G245900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 19186077-19188076 Setaria italica
Seita.9G245900 2.0kb downstream 2.0kb downstream 3063 true scaffold_9: 19188077-19191139 Setaria italica
Seita.9G245900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 19189140-19191139 Setaria italica
Seita.9G245900 5.0kb upstream 5.0kb upstream 6063 true scaffold_9: 19183077-19189139 Setaria italica
Seita.9G245900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 19183077-19188076 Setaria italica
Seita.9G245900 5.0kb downstream 5.0kb downstream 6063 true scaffold_9: 19188077-19194139 Setaria italica
Seita.9G245900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 19189140-19194139 Setaria italica
Seita.9G245900 10.0kb upstream 10.0kb upstream 11063 true scaffold_9: 19178077-19189139 Setaria italica
Seita.9G245900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 19178077-19188076 Setaria italica
Seita.9G245900 10.0kb downstream 10.0kb downstream 11063 true scaffold_9: 19188077-19199139 Setaria italica
Seita.9G245900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 19189140-19199139 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
122199631 5267 Panicoideae View MSA
124590470 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.698        
cufflinks 1.94       High
cufflinks 0.344        
cufflinks 0.235       Low
cufflinks 0.136       Low
cufflinks 1.775       High
cufflinks 0.766        
cufflinks 0.618        
cufflinks 0.333        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.785        
cufflinks 0.557        
cufflinks 0.595        
cufflinks 0.69        
cufflinks 0.747        
cufflinks 0.634        
cufflinks 0.61        
cufflinks 0.547        
cufflinks 0.374        
cufflinks 0.9        

0 Strain