Protein Family : retrotransposon protein, putative, LINE subclass, expressed 123314552

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  448

448 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Traes_1AL_783DB203B   T. aestivum v2.2 2162   ta_iwgsc_1al_v2_3905886: 1210-3371
Traes_1AL_83F45B741   T. aestivum v2.2 1254   ta_iwgsc_1al_v2_3969498: 17309-18562
Traes_1BS_E38D62963   T. aestivum v2.2 1760   ta_iwgsc_1bs_v1_1615197: 1567-3326
Traes_1BS_8A628FBB0   T. aestivum v2.2 1467   ta_iwgsc_1bs_v1_3433927: 18686-20152
Traes_1BS_77245353D   T. aestivum v2.2 2545   ta_iwgsc_1bs_v1_3484510: 10112-12656
Traes_2AL_C3B599665 (1 of 416) 3.6.4.13 - RNA helicase T. aestivum v2.2 952   ta_iwgsc_2al_v1_6349750: 22875-23826
Traes_2BL_EB2475141   T. aestivum v2.2 609   ta_iwgsc_2bl_v1_7975983: 5902-6510
Traes_2BL_6E37FC9F0   T. aestivum v2.2 1857   ta_iwgsc_2bl_v1_7983371: 13145-15001
Traes_2BL_989D24A40   T. aestivum v2.2 1434   ta_iwgsc_2bl_v1_8021190: 4033-5466
Traes_3B_D674420E0 (1 of 5050) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase T. aestivum v2.2 7193   ta_iwgsc_3b_v1_10657486: 45-7237
Traes_4AS_9B54F8AA9   T. aestivum v2.2 1467   ta_iwgsc_4as_v2_5955649: 5038-6504
Traes_4AS_830B8DBAF (1 of 1) K15219 - RNA polymerase I-specific transcription initiation factor RRN7 (RRN7) T. aestivum v2.2 8206   ta_iwgsc_4as_v2_5987685: 18243-26448
Traes_4BS_5C2F45F5B   T. aestivum v2.2 1467   ta_iwgsc_4bs_v1_4884470: 5383-6849
Traes_5DS_5F819007F   T. aestivum v2.2 2974   ta_iwgsc_5ds_v1_2747799: 3790-6763
Traes_6AS_C58C9C16F (1 of 416) 3.6.4.13 - RNA helicase T. aestivum v2.2 1720   ta_iwgsc_6as_v1_4346508: 2-1721
Traes_6AS_DDCAD57D1   T. aestivum v2.2 609   ta_iwgsc_6as_v1_4429440: 376-984
Traes_7DL_2A0FE0A7D (1 of 416) 3.6.4.13 - RNA helicase T. aestivum v2.2 2987   ta_iwgsc_7dl_v1_3371897: 2-2988
Seita.1G122500   S. italica v2.2 1524   scaffold_1: 10637259-10638782
Seita.2G381200   S. italica v2.2 2866   scaffold_2: 45098700-45101565
Seita.4G153600   S. italica v2.2 3050   scaffold_4: 20714220-20717269
Seita.9G245900   S. italica v2.2 1063   scaffold_9: 19188077-19189139
Seita.9G443100   S. italica v2.2 807   scaffold_9: 49387775-49388581
Bradi1g00335   B. distachyon v3.1 2726   Bd1: 244375-247100
Bradi1g25142   B. distachyon v3.1 2937   Bd1: 20421203-20424139
Bradi1g28896   B. distachyon v3.1 2851   Bd1: 24273664-24276514
Bradi1g38115   B. distachyon v3.1 2103   Bd1: 34409121-34411223
Bradi1g47666   B. distachyon v3.1 2065   Bd1: 46506431-46508495
Bradi5g09165 (1 of 10) PTHR22639 - GAG-RELATED PROTEIN B. distachyon v3.1 2518   Bd5: 12547093-12549610
Bradi5g08877 (1 of 10) PTHR22639 - GAG-RELATED PROTEIN B. distachyon v3.1 1851   Bd5: 12121298-12123148
Bradi5g10404   B. distachyon v3.1 2030   Bd5: 13776280-13778309

448 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Traes_1BS_E38D62963.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_1AL_783DB203B.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_1AL_83F45B741.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_1BS_8A628FBB0.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_1BS_77245353D.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_2AL_C3B599665.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_2BL_EB2475141.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_2BL_6E37FC9F0.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_2BL_989D24A40.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_3B_D674420E0.2 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_4AS_9B54F8AA9.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_4AS_830B8DBAF.2 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_4BS_5C2F45F5B.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_5DS_5F819007F.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_6AS_C58C9C16F.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_6AS_DDCAD57D1.1 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Traes_7DL_2A0FE0A7D.2 T. aestivum v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 17 5275 Viridiplantae
Seita.4G153600.1.p S. italica v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 5 5275 Viridiplantae
Seita.9G245900.1.p S. italica v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 5 5275 Viridiplantae
Seita.1G122500.1.p S. italica v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 5 5275 Viridiplantae
Seita.9G443100.1.p S. italica v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 5 5275 Viridiplantae
Seita.2G381200.1.p S. italica v2.2 123314552 retrotransposon protein, putative, LINE subclass, expressed 5 5275 Viridiplantae
Bradi3g20864.1.p B. distachyon v3.1 123314552 retrotransposon protein, putative, LINE subclass, expressed 29 5275 Viridiplantae
Bradi3g21471.1.p B. distachyon v3.1 123314552 retrotransposon protein, putative, LINE subclass, expressed 29 5275 Viridiplantae
Bradi3g28775.1.p B. distachyon v3.1 123314552 retrotransposon protein, putative, LINE subclass, expressed 29 5275 Viridiplantae
Bradi3g32386.1.p B. distachyon v3.1 123314552 retrotransposon protein, putative, LINE subclass, expressed 29 5275 Viridiplantae
Bradi4g15112.1.p B. distachyon v3.1 123314552 retrotransposon protein, putative, LINE subclass, expressed 29 5275 Viridiplantae
Bradi4g04495.1.p B. distachyon v3.1 123314552 retrotransposon protein, putative, LINE subclass, expressed 29 5275 Viridiplantae
Bradi3g41205.2.p B. distachyon v3.1 123314552 retrotransposon protein, putative, LINE subclass, expressed 29 5275 Viridiplantae
Bradi3g36693.1.p B. distachyon v3.1 123314552 retrotransposon protein, putative, LINE subclass, expressed 29 5275 Viridiplantae