Gene : Seita.9G443100 S. italica v2.2
Genomic Order:  4431 Name:  ? Seita.9G443100
Secondary Identifier:  ? PAC:32692383
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G443100 0.5kb upstream 0.5kb upstream 1307 true scaffold_9: 49387775-49389081 Setaria italica
Seita.9G443100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 49388582-49389081 Setaria italica
Seita.9G443100 0.5kb downstream 0.5kb downstream 1307 true scaffold_9: 49387275-49388581 Setaria italica
Seita.9G443100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 49387275-49387774 Setaria italica
Seita.9G443100 1.0kb upstream 1.0kb upstream 1807 true scaffold_9: 49387775-49389581 Setaria italica
Seita.9G443100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 49388582-49389581 Setaria italica
Seita.9G443100 1.0kb downstream 1.0kb downstream 1807 true scaffold_9: 49386775-49388581 Setaria italica
Seita.9G443100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 49386775-49387774 Setaria italica
Seita.9G443100 2.0kb upstream 2.0kb upstream 2807 true scaffold_9: 49387775-49390581 Setaria italica
Seita.9G443100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 49388582-49390581 Setaria italica
Seita.9G443100 2.0kb downstream 2.0kb downstream 2807 true scaffold_9: 49385775-49388581 Setaria italica
Seita.9G443100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 49385775-49387774 Setaria italica
Seita.9G443100 5.0kb upstream 5.0kb upstream 5807 true scaffold_9: 49387775-49393581 Setaria italica
Seita.9G443100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 49388582-49393581 Setaria italica
Seita.9G443100 5.0kb downstream 5.0kb downstream 5807 true scaffold_9: 49382775-49388581 Setaria italica
Seita.9G443100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 49382775-49387774 Setaria italica
Seita.9G443100 10.0kb upstream 10.0kb upstream 10807 true scaffold_9: 49387775-49398581 Setaria italica
Seita.9G443100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 49388582-49398581 Setaria italica
Seita.9G443100 10.0kb downstream 10.0kb downstream 10807 true scaffold_9: 49377775-49388581 Setaria italica
Seita.9G443100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 49377775-49387774 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
122198555 5267 Panicoideae View MSA
124589627 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low Low
cufflinks 0.382       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.176       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.158        
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low  
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  

0 Strain