Gene : Bradi1g47666 B. distachyon v3.1
Genomic Order:  5944 Name:  ? Bradi1g47666
Secondary Identifier:  ? PAC:32797688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g47666 0.5kb upstream 0.5kb upstream 2565 true Bd1: 46505931-46508495 Brachypodium distachyon
Bradi1g47666 0.5kb upstream 0.5kb upstream 500 false Bd1: 46505931-46506430 Brachypodium distachyon
Bradi1g47666 0.5kb downstream 0.5kb downstream 2565 true Bd1: 46506431-46508995 Brachypodium distachyon
Bradi1g47666 0.5kb downstream 0.5kb downstream 500 false Bd1: 46508496-46508995 Brachypodium distachyon
Bradi1g47666 1.0kb upstream 1.0kb upstream 3065 true Bd1: 46505431-46508495 Brachypodium distachyon
Bradi1g47666 1.0kb upstream 1.0kb upstream 1000 false Bd1: 46505431-46506430 Brachypodium distachyon
Bradi1g47666 1.0kb downstream 1.0kb downstream 3065 true Bd1: 46506431-46509495 Brachypodium distachyon
Bradi1g47666 1.0kb downstream 1.0kb downstream 1000 false Bd1: 46508496-46509495 Brachypodium distachyon
Bradi1g47666 2.0kb upstream 2.0kb upstream 4065 true Bd1: 46504431-46508495 Brachypodium distachyon
Bradi1g47666 2.0kb upstream 2.0kb upstream 2000 false Bd1: 46504431-46506430 Brachypodium distachyon
Bradi1g47666 2.0kb downstream 2.0kb downstream 4065 true Bd1: 46506431-46510495 Brachypodium distachyon
Bradi1g47666 2.0kb downstream 2.0kb downstream 2000 false Bd1: 46508496-46510495 Brachypodium distachyon
Bradi1g47666 5.0kb upstream 5.0kb upstream 7065 true Bd1: 46501431-46508495 Brachypodium distachyon
Bradi1g47666 5.0kb upstream 5.0kb upstream 5000 false Bd1: 46501431-46506430 Brachypodium distachyon
Bradi1g47666 5.0kb downstream 5.0kb downstream 7065 true Bd1: 46506431-46513495 Brachypodium distachyon
Bradi1g47666 5.0kb downstream 5.0kb downstream 5000 false Bd1: 46508496-46513495 Brachypodium distachyon
Bradi1g47666 10.0kb upstream 10.0kb upstream 12065 true Bd1: 46496431-46508495 Brachypodium distachyon
Bradi1g47666 10.0kb upstream 10.0kb upstream 10000 false Bd1: 46496431-46506430 Brachypodium distachyon
Bradi1g47666 10.0kb downstream 10.0kb downstream 12065 true Bd1: 46506431-46518495 Brachypodium distachyon
Bradi1g47666 10.0kb downstream 10.0kb downstream 10000 false Bd1: 46508496-46518495 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
124589627 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.434        
cufflinks 0.748        
cufflinks 0.622        
cufflinks 0.591        
cufflinks 0.397        
cufflinks 0.777        
cufflinks 1.016        
cufflinks 0.788        
cufflinks 1.05        
cufflinks 0.607        
cufflinks 0.066     Low Low
cufflinks 0.468        
cufflinks 0.116       Low
cufflinks 0.032     Low Low
cufflinks 0.202        
cufflinks 0.777        
cufflinks 0.357        
cufflinks 1.471       High
cufflinks 0.514        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.191       High
cufflinks 0.688        
cufflinks 0.729        
cufflinks 0.417        
cufflinks 0.711        
cufflinks 0.622        
cufflinks 0.06     Low Low
cufflinks 0.638        
cufflinks 0.382        
cufflinks 1.204       High

0 Strain