Gene : Seita.4G153600 S. italica v2.2
Genomic Order:  1536 Name:  ? Seita.4G153600
Secondary Identifier:  ? PAC:32707183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G153600 0.5kb upstream 0.5kb upstream 3550 true scaffold_4: 20713720-20717269 Setaria italica
Seita.4G153600 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20713720-20714219 Setaria italica
Seita.4G153600 0.5kb downstream 0.5kb downstream 3550 true scaffold_4: 20714220-20717769 Setaria italica
Seita.4G153600 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20717270-20717769 Setaria italica
Seita.4G153600 1.0kb upstream 1.0kb upstream 4050 true scaffold_4: 20713220-20717269 Setaria italica
Seita.4G153600 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20713220-20714219 Setaria italica
Seita.4G153600 1.0kb downstream 1.0kb downstream 4050 true scaffold_4: 20714220-20718269 Setaria italica
Seita.4G153600 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20717270-20718269 Setaria italica
Seita.4G153600 2.0kb upstream 2.0kb upstream 5050 true scaffold_4: 20712220-20717269 Setaria italica
Seita.4G153600 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20712220-20714219 Setaria italica
Seita.4G153600 2.0kb downstream 2.0kb downstream 5050 true scaffold_4: 20714220-20719269 Setaria italica
Seita.4G153600 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20717270-20719269 Setaria italica
Seita.4G153600 5.0kb upstream 5.0kb upstream 8050 true scaffold_4: 20709220-20717269 Setaria italica
Seita.4G153600 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20709220-20714219 Setaria italica
Seita.4G153600 5.0kb downstream 5.0kb downstream 8050 true scaffold_4: 20714220-20722269 Setaria italica
Seita.4G153600 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20717270-20722269 Setaria italica
Seita.4G153600 10.0kb upstream 10.0kb upstream 13050 true scaffold_4: 20704220-20717269 Setaria italica
Seita.4G153600 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20704220-20714219 Setaria italica
Seita.4G153600 10.0kb downstream 10.0kb downstream 13050 true scaffold_4: 20714220-20727269 Setaria italica
Seita.4G153600 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20717270-20727269 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
122199631 5267 Panicoideae View MSA
124590470 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain