Gene : Bradi5g10404 B. distachyon v3.1
Genomic Order:  1085 Name:  ? Bradi5g10404
Secondary Identifier:  ? PAC:32807155
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10404 0.5kb upstream 0.5kb upstream 2530 true Bd5: 13776280-13778809 Brachypodium distachyon
Bradi5g10404 0.5kb upstream 0.5kb upstream 500 false Bd5: 13778310-13778809 Brachypodium distachyon
Bradi5g10404 0.5kb downstream 0.5kb downstream 2530 true Bd5: 13775780-13778309 Brachypodium distachyon
Bradi5g10404 0.5kb downstream 0.5kb downstream 500 false Bd5: 13775780-13776279 Brachypodium distachyon
Bradi5g10404 1.0kb upstream 1.0kb upstream 3030 true Bd5: 13776280-13779309 Brachypodium distachyon
Bradi5g10404 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13778310-13779309 Brachypodium distachyon
Bradi5g10404 1.0kb downstream 1.0kb downstream 3030 true Bd5: 13775280-13778309 Brachypodium distachyon
Bradi5g10404 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13775280-13776279 Brachypodium distachyon
Bradi5g10404 2.0kb upstream 2.0kb upstream 4030 true Bd5: 13776280-13780309 Brachypodium distachyon
Bradi5g10404 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13778310-13780309 Brachypodium distachyon
Bradi5g10404 2.0kb downstream 2.0kb downstream 4030 true Bd5: 13774280-13778309 Brachypodium distachyon
Bradi5g10404 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13774280-13776279 Brachypodium distachyon
Bradi5g10404 5.0kb upstream 5.0kb upstream 7030 true Bd5: 13776280-13783309 Brachypodium distachyon
Bradi5g10404 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13778310-13783309 Brachypodium distachyon
Bradi5g10404 5.0kb downstream 5.0kb downstream 7030 true Bd5: 13771280-13778309 Brachypodium distachyon
Bradi5g10404 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13771280-13776279 Brachypodium distachyon
Bradi5g10404 10.0kb upstream 10.0kb upstream 12030 true Bd5: 13776280-13788309 Brachypodium distachyon
Bradi5g10404 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13778310-13788309 Brachypodium distachyon
Bradi5g10404 10.0kb downstream 10.0kb downstream 12030 true Bd5: 13766280-13778309 Brachypodium distachyon
Bradi5g10404 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13766280-13776279 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
124590470 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low Low
cufflinks 0.082     Low  
cufflinks 0.109        
cufflinks 0.1        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.108        
cufflinks 0.123        
cufflinks 0.055     Low  
cufflinks 0.087     Low  
cufflinks 0.052     Low  
cufflinks 0.107        
cufflinks 0.079     Low  
cufflinks 0.007     Low Low
cufflinks 0.011     Low Low
cufflinks 0.016     Low Low
cufflinks 0.054     Low  
cufflinks 0.096     Low  
cufflinks 0.185       High
cufflinks 0.132     Low  
cufflinks 0.137     Low  
cufflinks 0.133        
cufflinks 0.088     Low  
cufflinks 0.042     Low  
cufflinks 0.061     Low  
cufflinks 0.099     Low  
cufflinks 0.118        
cufflinks 0.049     Low  
cufflinks 0.019     Low Low
cufflinks 0.131        
cufflinks 0.213       High

0 Strain