Gene : Bradi5g09165 B. distachyon v3.1
Defline:  (1 of 10) PTHR22639 - GAG-RELATED PROTEIN Genomic Order:  923
Name:  ? Bradi5g09165 Secondary Identifier:  ? PAC:32811295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g09165 0.5kb upstream 0.5kb upstream 3018 true Bd5: 12547093-12550110 Brachypodium distachyon
Bradi5g09165 0.5kb upstream 0.5kb upstream 500 false Bd5: 12549611-12550110 Brachypodium distachyon
Bradi5g09165 0.5kb downstream 0.5kb downstream 3018 true Bd5: 12546593-12549610 Brachypodium distachyon
Bradi5g09165 0.5kb downstream 0.5kb downstream 500 false Bd5: 12546593-12547092 Brachypodium distachyon
Bradi5g09165 1.0kb upstream 1.0kb upstream 3518 true Bd5: 12547093-12550610 Brachypodium distachyon
Bradi5g09165 1.0kb upstream 1.0kb upstream 1000 false Bd5: 12549611-12550610 Brachypodium distachyon
Bradi5g09165 1.0kb downstream 1.0kb downstream 3518 true Bd5: 12546093-12549610 Brachypodium distachyon
Bradi5g09165 1.0kb downstream 1.0kb downstream 1000 false Bd5: 12546093-12547092 Brachypodium distachyon
Bradi5g09165 2.0kb upstream 2.0kb upstream 4518 true Bd5: 12547093-12551610 Brachypodium distachyon
Bradi5g09165 2.0kb upstream 2.0kb upstream 2000 false Bd5: 12549611-12551610 Brachypodium distachyon
Bradi5g09165 2.0kb downstream 2.0kb downstream 4518 true Bd5: 12545093-12549610 Brachypodium distachyon
Bradi5g09165 2.0kb downstream 2.0kb downstream 2000 false Bd5: 12545093-12547092 Brachypodium distachyon
Bradi5g09165 5.0kb upstream 5.0kb upstream 7518 true Bd5: 12547093-12554610 Brachypodium distachyon
Bradi5g09165 5.0kb upstream 5.0kb upstream 5000 false Bd5: 12549611-12554610 Brachypodium distachyon
Bradi5g09165 5.0kb downstream 5.0kb downstream 7518 true Bd5: 12542093-12549610 Brachypodium distachyon
Bradi5g09165 5.0kb downstream 5.0kb downstream 5000 false Bd5: 12542093-12547092 Brachypodium distachyon
Bradi5g09165 10.0kb upstream 10.0kb upstream 12518 true Bd5: 12547093-12559610 Brachypodium distachyon
Bradi5g09165 10.0kb upstream 10.0kb upstream 10000 false Bd5: 12549611-12559610 Brachypodium distachyon
Bradi5g09165 10.0kb downstream 10.0kb downstream 12518 true Bd5: 12537093-12549610 Brachypodium distachyon
Bradi5g09165 10.0kb downstream 10.0kb downstream 10000 false Bd5: 12537093-12547092 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
124589627 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105        
cufflinks 0.196        
cufflinks 0.228        
cufflinks 0.128        
cufflinks 0.502       High
cufflinks 0.167        
cufflinks 0.254        
cufflinks 0.111        
cufflinks 0.25        
cufflinks 0.161        
cufflinks 0.223        
cufflinks 0.087        
cufflinks 0.095        
cufflinks 0.081        
cufflinks 0.044     Low Low
cufflinks 0.187        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.401       High
cufflinks 0.397       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.26        
cufflinks 0.219        
cufflinks 0.168        
cufflinks 0.184        
cufflinks 0.109        
cufflinks 0.202        
cufflinks 0.01     Low Low
cufflinks 0.231        
cufflinks 0.312        
cufflinks 0.299        

0 Strain