Gene : Seita.9G204000 S. italica v2.2
Defline:  (1 of 1) PTHR13479:SF44 - F10K1.8 PROTEIN Genomic Order:  2040
Name:  ? Seita.9G204000 Secondary Identifier:  ? PAC:32693605
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G204000 0.5kb upstream 0.5kb upstream 4087 true scaffold_9: 14592323-14596409 Setaria italica
Seita.9G204000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14595910-14596409 Setaria italica
Seita.9G204000 0.5kb downstream 0.5kb downstream 4087 true scaffold_9: 14591823-14595909 Setaria italica
Seita.9G204000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14591823-14592322 Setaria italica
Seita.9G204000 1.0kb upstream 1.0kb upstream 4587 true scaffold_9: 14592323-14596909 Setaria italica
Seita.9G204000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14595910-14596909 Setaria italica
Seita.9G204000 1.0kb downstream 1.0kb downstream 4587 true scaffold_9: 14591323-14595909 Setaria italica
Seita.9G204000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14591323-14592322 Setaria italica
Seita.9G204000 2.0kb upstream 2.0kb upstream 5587 true scaffold_9: 14592323-14597909 Setaria italica
Seita.9G204000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14595910-14597909 Setaria italica
Seita.9G204000 2.0kb downstream 2.0kb downstream 5587 true scaffold_9: 14590323-14595909 Setaria italica
Seita.9G204000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14590323-14592322 Setaria italica
Seita.9G204000 5.0kb upstream 5.0kb upstream 8587 true scaffold_9: 14592323-14600909 Setaria italica
Seita.9G204000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14595910-14600909 Setaria italica
Seita.9G204000 5.0kb downstream 5.0kb downstream 8587 true scaffold_9: 14587323-14595909 Setaria italica
Seita.9G204000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14587323-14592322 Setaria italica
Seita.9G204000 10.0kb upstream 10.0kb upstream 13587 true scaffold_9: 14592323-14605909 Setaria italica
Seita.9G204000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14595910-14605909 Setaria italica
Seita.9G204000 10.0kb downstream 10.0kb downstream 13587 true scaffold_9: 14582323-14595909 Setaria italica
Seita.9G204000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14582323-14592322 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188197 5267 Panicoideae View MSA
124586692 5269 Grass View MSA
122043226 5273 Angiosperm View MSA
121343856 5274 Embryophyte View MSA
123427429 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.911     High  
cufflinks 17.962     High  
cufflinks 8.405        
cufflinks 8.475        
cufflinks 7.877       Low
cufflinks 17.011     High  
cufflinks 9.531        
cufflinks 13.17        
cufflinks 13.056     High  
cufflinks 16.488     High  
cufflinks 14.682     High  
cufflinks 20.183     High High
cufflinks 17.918     High  
cufflinks 10.378        
cufflinks 16.885     High  
cufflinks 6.519       Low
cufflinks 25.221     High High
cufflinks 7.572       Low
cufflinks 6.795       Low
cufflinks 24.832     High High

0 Strain