Gene : Seita.9G203800 S. italica v2.2
Defline:  (1 of 1) PTHR10293:SF40 - GLUTAREDOXIN-3 Genomic Order:  2038
Name:  ? Seita.9G203800 Secondary Identifier:  ? PAC:32688374
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G203800 0.5kb upstream 0.5kb upstream 4829 true scaffold_9: 14582211-14587039 Setaria italica
Seita.9G203800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14586540-14587039 Setaria italica
Seita.9G203800 0.5kb downstream 0.5kb downstream 4829 true scaffold_9: 14581711-14586539 Setaria italica
Seita.9G203800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14581711-14582210 Setaria italica
Seita.9G203800 1.0kb upstream 1.0kb upstream 5329 true scaffold_9: 14582211-14587539 Setaria italica
Seita.9G203800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14586540-14587539 Setaria italica
Seita.9G203800 1.0kb downstream 1.0kb downstream 5329 true scaffold_9: 14581211-14586539 Setaria italica
Seita.9G203800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14581211-14582210 Setaria italica
Seita.9G203800 2.0kb upstream 2.0kb upstream 6329 true scaffold_9: 14582211-14588539 Setaria italica
Seita.9G203800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14586540-14588539 Setaria italica
Seita.9G203800 2.0kb downstream 2.0kb downstream 6329 true scaffold_9: 14580211-14586539 Setaria italica
Seita.9G203800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14580211-14582210 Setaria italica
Seita.9G203800 5.0kb upstream 5.0kb upstream 9329 true scaffold_9: 14582211-14591539 Setaria italica
Seita.9G203800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14586540-14591539 Setaria italica
Seita.9G203800 5.0kb downstream 5.0kb downstream 9329 true scaffold_9: 14577211-14586539 Setaria italica
Seita.9G203800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14577211-14582210 Setaria italica
Seita.9G203800 10.0kb upstream 10.0kb upstream 14329 true scaffold_9: 14582211-14596539 Setaria italica
Seita.9G203800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14586540-14596539 Setaria italica
Seita.9G203800 10.0kb downstream 10.0kb downstream 14329 true scaffold_9: 14572211-14586539 Setaria italica
Seita.9G203800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14572211-14582210 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040872 5273 Angiosperm View MSA
122180161 5267 Panicoideae View MSA
124573731 5269 Grass View MSA
121349361 5274 Embryophyte View MSA
123428692 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.692     High  
cufflinks 18.732     High Low
cufflinks 31.877     High High
cufflinks 32.866     High High
cufflinks 28.922     High  
cufflinks 17.82     High Low
cufflinks 18.765     High Low
cufflinks 20.523     High  
cufflinks 18.549     High Low
cufflinks 15.656     High Low
cufflinks 23.421     High  
cufflinks 29.785     High  
cufflinks 24.3     High  
cufflinks 23.464     High  
cufflinks 26.124     High  
cufflinks 23.016     High  
cufflinks 31.23     High  
cufflinks 39.741     High High
cufflinks 27.467     High  
cufflinks 23.407     High  

0 Strain