Gene : Seita.9G205900 S. italica v2.2
Defline:  (1 of 1) PTHR12736 - LANC-LIKE PROTEIN Genomic Order:  2059
Name:  ? Seita.9G205900 Secondary Identifier:  ? PAC:32686669
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G205900 0.5kb upstream 0.5kb upstream 4328 true scaffold_9: 14739426-14743753 Setaria italica
Seita.9G205900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14743254-14743753 Setaria italica
Seita.9G205900 0.5kb downstream 0.5kb downstream 4328 true scaffold_9: 14738926-14743253 Setaria italica
Seita.9G205900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14738926-14739425 Setaria italica
Seita.9G205900 1.0kb upstream 1.0kb upstream 4828 true scaffold_9: 14739426-14744253 Setaria italica
Seita.9G205900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14743254-14744253 Setaria italica
Seita.9G205900 1.0kb downstream 1.0kb downstream 4828 true scaffold_9: 14738426-14743253 Setaria italica
Seita.9G205900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14738426-14739425 Setaria italica
Seita.9G205900 2.0kb upstream 2.0kb upstream 5828 true scaffold_9: 14739426-14745253 Setaria italica
Seita.9G205900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14743254-14745253 Setaria italica
Seita.9G205900 2.0kb downstream 2.0kb downstream 5828 true scaffold_9: 14737426-14743253 Setaria italica
Seita.9G205900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14737426-14739425 Setaria italica
Seita.9G205900 5.0kb upstream 5.0kb upstream 8828 true scaffold_9: 14739426-14748253 Setaria italica
Seita.9G205900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14743254-14748253 Setaria italica
Seita.9G205900 5.0kb downstream 5.0kb downstream 8828 true scaffold_9: 14734426-14743253 Setaria italica
Seita.9G205900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14734426-14739425 Setaria italica
Seita.9G205900 10.0kb upstream 10.0kb upstream 13828 true scaffold_9: 14739426-14753253 Setaria italica
Seita.9G205900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14743254-14753253 Setaria italica
Seita.9G205900 10.0kb downstream 10.0kb downstream 13828 true scaffold_9: 14729426-14743253 Setaria italica
Seita.9G205900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14729426-14739425 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181709 5267 Panicoideae View MSA
124572188 5269 Grass View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.744        
cufflinks 0.695        
cufflinks 0.471        
cufflinks 0.452        
cufflinks 0.598        
cufflinks 0.588        
cufflinks 0.425        
cufflinks 1.015        
cufflinks 0.439        
cufflinks 0.284     Low Low
cufflinks 0.846        
cufflinks 1.108        
cufflinks 1.487       High
cufflinks 1.448       High
cufflinks 1.588       High
cufflinks 0.487        
cufflinks 2.078       High
cufflinks 0.301       Low
cufflinks 0.837        
cufflinks 1.653       High

0 Strain