Gene : Seita.9G209100 S. italica v2.2
Defline:  (1 of 7) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  2091
Name:  ? Seita.9G209100 Secondary Identifier:  ? PAC:32692789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G209100 0.5kb upstream 0.5kb upstream 1184 true scaffold_9: 15036033-15037216 Setaria italica
Seita.9G209100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 15036717-15037216 Setaria italica
Seita.9G209100 0.5kb downstream 0.5kb downstream 1184 true scaffold_9: 15035533-15036716 Setaria italica
Seita.9G209100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 15035533-15036032 Setaria italica
Seita.9G209100 1.0kb upstream 1.0kb upstream 1684 true scaffold_9: 15036033-15037716 Setaria italica
Seita.9G209100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 15036717-15037716 Setaria italica
Seita.9G209100 1.0kb downstream 1.0kb downstream 1684 true scaffold_9: 15035033-15036716 Setaria italica
Seita.9G209100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 15035033-15036032 Setaria italica
Seita.9G209100 2.0kb upstream 2.0kb upstream 2684 true scaffold_9: 15036033-15038716 Setaria italica
Seita.9G209100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 15036717-15038716 Setaria italica
Seita.9G209100 2.0kb downstream 2.0kb downstream 2684 true scaffold_9: 15034033-15036716 Setaria italica
Seita.9G209100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 15034033-15036032 Setaria italica
Seita.9G209100 5.0kb upstream 5.0kb upstream 5684 true scaffold_9: 15036033-15041716 Setaria italica
Seita.9G209100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 15036717-15041716 Setaria italica
Seita.9G209100 5.0kb downstream 5.0kb downstream 5684 true scaffold_9: 15031033-15036716 Setaria italica
Seita.9G209100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 15031033-15036032 Setaria italica
Seita.9G209100 10.0kb upstream 10.0kb upstream 10684 true scaffold_9: 15036033-15046716 Setaria italica
Seita.9G209100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 15036717-15046716 Setaria italica
Seita.9G209100 10.0kb downstream 10.0kb downstream 10684 true scaffold_9: 15026033-15036716 Setaria italica
Seita.9G209100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 15026033-15036032 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192671 5267 Panicoideae View MSA
124585877 5269 Grass View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.979     High  
cufflinks 3.401       Low
cufflinks 21.303     High  
cufflinks 20.503     High  
cufflinks 28.734     High  
cufflinks 4.082        
cufflinks 16.531     High  
cufflinks 12.223        
cufflinks 12.347        
cufflinks 12.437        
cufflinks 12.77        
cufflinks 8.709        
cufflinks 1.626       Low
cufflinks 92.77     High High
cufflinks 8.014        
cufflinks 4.55        
cufflinks 6.406        
cufflinks 2.748       Low
cufflinks 146.087     High High
cufflinks 4.774        

0 Strain