Gene : Seita.9G294800 S. italica v2.2
Defline:  (1 of 1) PTHR10106//PTHR10106:SF13 - CYTOCHROME B561-RELATED Genomic Order:  2948
Name:  ? Seita.9G294800 Secondary Identifier:  ? PAC:32687451
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G294800 0.5kb upstream 0.5kb upstream 2185 true scaffold_9: 33670595-33672779 Setaria italica
Seita.9G294800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33670595-33671094 Setaria italica
Seita.9G294800 0.5kb downstream 0.5kb downstream 2185 true scaffold_9: 33671095-33673279 Setaria italica
Seita.9G294800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33672780-33673279 Setaria italica
Seita.9G294800 1.0kb upstream 1.0kb upstream 2685 true scaffold_9: 33670095-33672779 Setaria italica
Seita.9G294800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33670095-33671094 Setaria italica
Seita.9G294800 1.0kb downstream 1.0kb downstream 2685 true scaffold_9: 33671095-33673779 Setaria italica
Seita.9G294800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33672780-33673779 Setaria italica
Seita.9G294800 2.0kb upstream 2.0kb upstream 3685 true scaffold_9: 33669095-33672779 Setaria italica
Seita.9G294800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33669095-33671094 Setaria italica
Seita.9G294800 2.0kb downstream 2.0kb downstream 3685 true scaffold_9: 33671095-33674779 Setaria italica
Seita.9G294800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33672780-33674779 Setaria italica
Seita.9G294800 5.0kb upstream 5.0kb upstream 6685 true scaffold_9: 33666095-33672779 Setaria italica
Seita.9G294800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33666095-33671094 Setaria italica
Seita.9G294800 5.0kb downstream 5.0kb downstream 6685 true scaffold_9: 33671095-33677779 Setaria italica
Seita.9G294800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33672780-33677779 Setaria italica
Seita.9G294800 10.0kb upstream 10.0kb upstream 11685 true scaffold_9: 33661095-33672779 Setaria italica
Seita.9G294800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33661095-33671094 Setaria italica
Seita.9G294800 10.0kb downstream 10.0kb downstream 11685 true scaffold_9: 33671095-33682779 Setaria italica
Seita.9G294800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33672780-33682779 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177573 5267 Panicoideae View MSA
124571146 5269 Grass View MSA
122048589 5273 Angiosperm View MSA
123429174 5275 Viridiplantae View MSA
121311029 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.047     Low Low
cufflinks 0.018     Low Low
cufflinks 0.101        
cufflinks 0.204        
cufflinks 0.181        
cufflinks 0.052     Low  
cufflinks 0.606       High
cufflinks 0.056     Low  
cufflinks 0.08     Low  
cufflinks 0.05     Low  
cufflinks 0.104     Low  
cufflinks 0.147        
cufflinks 0.079     Low  
cufflinks 0.181        
cufflinks 0.053     Low  
cufflinks 0.33       High
cufflinks 0.252        
cufflinks 0.375       High
cufflinks 0.27        
cufflinks 0.071     Low  

0 Strain