Gene : Seita.9G258000 S. italica v2.2
Defline:  (1 of 1) PTHR19432//PTHR19432:SF39 - SUGAR TRANSPORTER Genomic Order:  2580
Name:  ? Seita.9G258000 Secondary Identifier:  ? PAC:32688842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G258000 0.5kb upstream 0.5kb upstream 5158 true scaffold_9: 21134669-21139826 Setaria italica
Seita.9G258000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 21134669-21135168 Setaria italica
Seita.9G258000 0.5kb downstream 0.5kb downstream 5158 true scaffold_9: 21135169-21140326 Setaria italica
Seita.9G258000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 21139827-21140326 Setaria italica
Seita.9G258000 1.0kb upstream 1.0kb upstream 5658 true scaffold_9: 21134169-21139826 Setaria italica
Seita.9G258000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 21134169-21135168 Setaria italica
Seita.9G258000 1.0kb downstream 1.0kb downstream 5658 true scaffold_9: 21135169-21140826 Setaria italica
Seita.9G258000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 21139827-21140826 Setaria italica
Seita.9G258000 2.0kb upstream 2.0kb upstream 6658 true scaffold_9: 21133169-21139826 Setaria italica
Seita.9G258000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 21133169-21135168 Setaria italica
Seita.9G258000 2.0kb downstream 2.0kb downstream 6658 true scaffold_9: 21135169-21141826 Setaria italica
Seita.9G258000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 21139827-21141826 Setaria italica
Seita.9G258000 5.0kb upstream 5.0kb upstream 9658 true scaffold_9: 21130169-21139826 Setaria italica
Seita.9G258000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 21130169-21135168 Setaria italica
Seita.9G258000 5.0kb downstream 5.0kb downstream 9658 true scaffold_9: 21135169-21144826 Setaria italica
Seita.9G258000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 21139827-21144826 Setaria italica
Seita.9G258000 10.0kb upstream 10.0kb upstream 14658 true scaffold_9: 21125169-21139826 Setaria italica
Seita.9G258000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 21125169-21135168 Setaria italica
Seita.9G258000 10.0kb downstream 10.0kb downstream 14658 true scaffold_9: 21135169-21149826 Setaria italica
Seita.9G258000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 21139827-21149826 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181834 5267 Panicoideae View MSA
124589834 5269 Grass View MSA
122051814 5273 Angiosperm View MSA
121351418 5274 Embryophyte View MSA
123382158 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.023     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.043     Low High
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.005     Low  
cufflinks 0.011     Low  
cufflinks 0.018     Low  
cufflinks 0.006     Low  
cufflinks 0.022     Low High

0 Strain