Gene : Seita.9G263900 S. italica v2.2
Genomic Order:  2639 Name:  ? Seita.9G263900
Secondary Identifier:  ? PAC:32693257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G263900 0.5kb upstream 0.5kb upstream 1339 true scaffold_9: 21881916-21883254 Setaria italica
Seita.9G263900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 21882755-21883254 Setaria italica
Seita.9G263900 0.5kb downstream 0.5kb downstream 1339 true scaffold_9: 21881416-21882754 Setaria italica
Seita.9G263900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 21881416-21881915 Setaria italica
Seita.9G263900 1.0kb upstream 1.0kb upstream 1839 true scaffold_9: 21881916-21883754 Setaria italica
Seita.9G263900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 21882755-21883754 Setaria italica
Seita.9G263900 1.0kb downstream 1.0kb downstream 1839 true scaffold_9: 21880916-21882754 Setaria italica
Seita.9G263900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 21880916-21881915 Setaria italica
Seita.9G263900 2.0kb upstream 2.0kb upstream 2839 true scaffold_9: 21881916-21884754 Setaria italica
Seita.9G263900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 21882755-21884754 Setaria italica
Seita.9G263900 2.0kb downstream 2.0kb downstream 2839 true scaffold_9: 21879916-21882754 Setaria italica
Seita.9G263900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 21879916-21881915 Setaria italica
Seita.9G263900 5.0kb upstream 5.0kb upstream 5839 true scaffold_9: 21881916-21887754 Setaria italica
Seita.9G263900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 21882755-21887754 Setaria italica
Seita.9G263900 5.0kb downstream 5.0kb downstream 5839 true scaffold_9: 21876916-21882754 Setaria italica
Seita.9G263900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 21876916-21881915 Setaria italica
Seita.9G263900 10.0kb upstream 10.0kb upstream 10839 true scaffold_9: 21881916-21892754 Setaria italica
Seita.9G263900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 21882755-21892754 Setaria italica
Seita.9G263900 10.0kb downstream 10.0kb downstream 10839 true scaffold_9: 21871916-21882754 Setaria italica
Seita.9G263900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 21871916-21881915 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199649 5267 Panicoideae View MSA
124571270 5269 Grass View MSA
122045923 5273 Angiosperm View MSA
121346832 5274 Embryophyte View MSA
123380452 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.311        
cufflinks 1.315       High
cufflinks 0.043     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low Low
cufflinks 0.592        
cufflinks 0.208        
cufflinks 0.402        
cufflinks 0.427        
cufflinks 0.948       High
cufflinks 0.342        
cufflinks 0.271        
cufflinks 0.399        
cufflinks 0.302        
cufflinks 0.366        
cufflinks 0.069     Low Low
cufflinks 0.714        
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.487        

0 Strain