Gene : Seita.9G269700 S. italica v2.2
Defline:  (1 of 1) PF06268 - Fascin domain (Fascin) Genomic Order:  2697
Name:  ? Seita.9G269700 Secondary Identifier:  ? PAC:32690495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G269700 0.5kb upstream 0.5kb upstream 7625 true scaffold_9: 22898702-22906326 Setaria italica
Seita.9G269700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 22898702-22899201 Setaria italica
Seita.9G269700 0.5kb downstream 0.5kb downstream 7625 true scaffold_9: 22899202-22906826 Setaria italica
Seita.9G269700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 22906327-22906826 Setaria italica
Seita.9G269700 1.0kb upstream 1.0kb upstream 8125 true scaffold_9: 22898202-22906326 Setaria italica
Seita.9G269700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 22898202-22899201 Setaria italica
Seita.9G269700 1.0kb downstream 1.0kb downstream 8125 true scaffold_9: 22899202-22907326 Setaria italica
Seita.9G269700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 22906327-22907326 Setaria italica
Seita.9G269700 2.0kb upstream 2.0kb upstream 9125 true scaffold_9: 22897202-22906326 Setaria italica
Seita.9G269700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 22897202-22899201 Setaria italica
Seita.9G269700 2.0kb downstream 2.0kb downstream 9125 true scaffold_9: 22899202-22908326 Setaria italica
Seita.9G269700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 22906327-22908326 Setaria italica
Seita.9G269700 5.0kb upstream 5.0kb upstream 12125 true scaffold_9: 22894202-22906326 Setaria italica
Seita.9G269700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 22894202-22899201 Setaria italica
Seita.9G269700 5.0kb downstream 5.0kb downstream 12125 true scaffold_9: 22899202-22911326 Setaria italica
Seita.9G269700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 22906327-22911326 Setaria italica
Seita.9G269700 10.0kb upstream 10.0kb upstream 17125 true scaffold_9: 22889202-22906326 Setaria italica
Seita.9G269700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 22889202-22899201 Setaria italica
Seita.9G269700 10.0kb downstream 10.0kb downstream 17125 true scaffold_9: 22899202-22916326 Setaria italica
Seita.9G269700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 22906327-22916326 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121795786 5273 Angiosperm Singleton cluster - no MSA
122055533 5267 Panicoideae Singleton cluster - no MSA
124355310 5269 Grass Singleton cluster - no MSA
121066955 5274 Embryophyte Singleton cluster - no MSA
123106611 5275 Viridiplantae Singleton cluster - no MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.715        
cufflinks 1.385       High
cufflinks 0.415        
cufflinks 0.258       Low
cufflinks 0.241       Low
cufflinks 0.941       High
cufflinks 0.696        
cufflinks 0.873        
cufflinks 0.392        
cufflinks 0.222     Low Low
cufflinks 0.676        
cufflinks 0.492        
cufflinks 0.484        
cufflinks 0.558        
cufflinks 0.586        
cufflinks 1.245       High
cufflinks 0.583        
cufflinks 0.489        
cufflinks 0.224       Low
cufflinks 0.742        

0 Strain