Gene : Seita.9G271900 S. italica v2.2
Defline:  (1 of 1) PTHR24423:SF363 - HISTIDINE KINASE 2 Genomic Order:  2719
Name:  ? Seita.9G271900 Secondary Identifier:  ? PAC:32691333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G271900 0.5kb upstream 0.5kb upstream 12305 true scaffold_9: 23477844-23490148 Setaria italica
Seita.9G271900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 23477844-23478343 Setaria italica
Seita.9G271900 0.5kb downstream 0.5kb downstream 12305 true scaffold_9: 23478344-23490648 Setaria italica
Seita.9G271900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 23490149-23490648 Setaria italica
Seita.9G271900 1.0kb upstream 1.0kb upstream 12805 true scaffold_9: 23477344-23490148 Setaria italica
Seita.9G271900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 23477344-23478343 Setaria italica
Seita.9G271900 1.0kb downstream 1.0kb downstream 12805 true scaffold_9: 23478344-23491148 Setaria italica
Seita.9G271900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 23490149-23491148 Setaria italica
Seita.9G271900 2.0kb upstream 2.0kb upstream 13805 true scaffold_9: 23476344-23490148 Setaria italica
Seita.9G271900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 23476344-23478343 Setaria italica
Seita.9G271900 2.0kb downstream 2.0kb downstream 13805 true scaffold_9: 23478344-23492148 Setaria italica
Seita.9G271900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 23490149-23492148 Setaria italica
Seita.9G271900 5.0kb upstream 5.0kb upstream 16805 true scaffold_9: 23473344-23490148 Setaria italica
Seita.9G271900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 23473344-23478343 Setaria italica
Seita.9G271900 5.0kb downstream 5.0kb downstream 16805 true scaffold_9: 23478344-23495148 Setaria italica
Seita.9G271900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 23490149-23495148 Setaria italica
Seita.9G271900 10.0kb upstream 10.0kb upstream 21805 true scaffold_9: 23468344-23490148 Setaria italica
Seita.9G271900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 23468344-23478343 Setaria italica
Seita.9G271900 10.0kb downstream 10.0kb downstream 21805 true scaffold_9: 23478344-23500148 Setaria italica
Seita.9G271900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 23490149-23500148 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194665 5267 Panicoideae View MSA
124579562 5269 Grass View MSA
122045050 5273 Angiosperm View MSA
123429048 5275 Viridiplantae View MSA
121351756 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.273        
cufflinks 2.519        
cufflinks 5.113       High
cufflinks 5.096       High
cufflinks 4.162        
cufflinks 2.728        
cufflinks 4.11        
cufflinks 3.809        
cufflinks 4.223        
cufflinks 0.922       Low
cufflinks 2.672        
cufflinks 2.016        
cufflinks 2.104        
cufflinks 5.415       High
cufflinks 3.046        
cufflinks 4.486        
cufflinks 1.679       Low
cufflinks 4.999       High
cufflinks 3.463        
cufflinks 2.091        

0 Strain