Gene : Seita.9G377700 S. italica v2.2
Defline:  (1 of 2) PTHR11711//PTHR11711:SF187 - ADP RIBOSYLATION FACTOR-RELATED Genomic Order:  3777
Name:  ? Seita.9G377700 Secondary Identifier:  ? PAC:32688808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G377700 0.5kb upstream 0.5kb upstream 4309 true scaffold_9: 43727074-43731382 Setaria italica
Seita.9G377700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 43730883-43731382 Setaria italica
Seita.9G377700 0.5kb downstream 0.5kb downstream 4309 true scaffold_9: 43726574-43730882 Setaria italica
Seita.9G377700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 43726574-43727073 Setaria italica
Seita.9G377700 1.0kb upstream 1.0kb upstream 4809 true scaffold_9: 43727074-43731882 Setaria italica
Seita.9G377700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 43730883-43731882 Setaria italica
Seita.9G377700 1.0kb downstream 1.0kb downstream 4809 true scaffold_9: 43726074-43730882 Setaria italica
Seita.9G377700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 43726074-43727073 Setaria italica
Seita.9G377700 2.0kb upstream 2.0kb upstream 5809 true scaffold_9: 43727074-43732882 Setaria italica
Seita.9G377700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 43730883-43732882 Setaria italica
Seita.9G377700 2.0kb downstream 2.0kb downstream 5809 true scaffold_9: 43725074-43730882 Setaria italica
Seita.9G377700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 43725074-43727073 Setaria italica
Seita.9G377700 5.0kb upstream 5.0kb upstream 8809 true scaffold_9: 43727074-43735882 Setaria italica
Seita.9G377700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 43730883-43735882 Setaria italica
Seita.9G377700 5.0kb downstream 5.0kb downstream 8809 true scaffold_9: 43722074-43730882 Setaria italica
Seita.9G377700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 43722074-43727073 Setaria italica
Seita.9G377700 10.0kb upstream 10.0kb upstream 13809 true scaffold_9: 43727074-43740882 Setaria italica
Seita.9G377700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 43730883-43740882 Setaria italica
Seita.9G377700 10.0kb downstream 10.0kb downstream 13809 true scaffold_9: 43717074-43730882 Setaria italica
Seita.9G377700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 43717074-43727073 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189522 5267 Panicoideae View MSA
124584007 5269 Grass View MSA
122045512 5273 Angiosperm View MSA
121347621 5274 Embryophyte View MSA
123424811 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.235        
cufflinks 7.977        
cufflinks 1.404       Low
cufflinks 1.256       Low
cufflinks 2.023        
cufflinks 10.043       High
cufflinks 4.204        
cufflinks 3.843        
cufflinks 3.078        
cufflinks 4.352        
cufflinks 5.605        
cufflinks 11.012       High
cufflinks 9.936       High
cufflinks 2.838        
cufflinks 8.37        
cufflinks 1.555       Low
cufflinks 13.313       High
cufflinks 0.747       Low
cufflinks 1.222       Low
cufflinks 10.008       High

0 Strain