Gene : Seita.9G401000 S. italica v2.2
Defline:  (1 of 1) PTHR11134//PTHR11134:SF14 - ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT Genomic Order:  4010
Name:  ? Seita.9G401000 Secondary Identifier:  ? PAC:32688448
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G401000 0.5kb upstream 0.5kb upstream 7154 true scaffold_9: 46118749-46125902 Setaria italica
Seita.9G401000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46118749-46119248 Setaria italica
Seita.9G401000 0.5kb downstream 0.5kb downstream 7154 true scaffold_9: 46119249-46126402 Setaria italica
Seita.9G401000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46125903-46126402 Setaria italica
Seita.9G401000 1.0kb upstream 1.0kb upstream 7654 true scaffold_9: 46118249-46125902 Setaria italica
Seita.9G401000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46118249-46119248 Setaria italica
Seita.9G401000 1.0kb downstream 1.0kb downstream 7654 true scaffold_9: 46119249-46126902 Setaria italica
Seita.9G401000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46125903-46126902 Setaria italica
Seita.9G401000 2.0kb upstream 2.0kb upstream 8654 true scaffold_9: 46117249-46125902 Setaria italica
Seita.9G401000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46117249-46119248 Setaria italica
Seita.9G401000 2.0kb downstream 2.0kb downstream 8654 true scaffold_9: 46119249-46127902 Setaria italica
Seita.9G401000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46125903-46127902 Setaria italica
Seita.9G401000 5.0kb upstream 5.0kb upstream 11654 true scaffold_9: 46114249-46125902 Setaria italica
Seita.9G401000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46114249-46119248 Setaria italica
Seita.9G401000 5.0kb downstream 5.0kb downstream 11654 true scaffold_9: 46119249-46130902 Setaria italica
Seita.9G401000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46125903-46130902 Setaria italica
Seita.9G401000 10.0kb upstream 10.0kb upstream 16654 true scaffold_9: 46109249-46125902 Setaria italica
Seita.9G401000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46109249-46119248 Setaria italica
Seita.9G401000 10.0kb downstream 10.0kb downstream 16654 true scaffold_9: 46119249-46135902 Setaria italica
Seita.9G401000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46125903-46135902 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191076 5267 Panicoideae View MSA
124570061 5269 Grass View MSA
122047828 5273 Angiosperm View MSA
121343872 5274 Embryophyte View MSA
123426129 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.338     High High
cufflinks 39.533     High High
cufflinks 19.75     High Low
cufflinks 17.175     High Low
cufflinks 16.141     High Low
cufflinks 37.165     High  
cufflinks 29.086     High  
cufflinks 22.504     High  
cufflinks 24.672     High  
cufflinks 31.696     High  
cufflinks 46.353     High High
cufflinks 28.938     High  
cufflinks 31.385     High  
cufflinks 19.553     High Low
cufflinks 42.735     High High
cufflinks 25.489     High  
cufflinks 31.651     High  
cufflinks 27.324     High  
cufflinks 20.66     High  
cufflinks 36.828     High  

0 Strain