Gene : Seita.9G339800 S. italica v2.2
Defline:  (1 of 1) PF02068 - Plant PEC family metallothionein (Metallothio_PEC) Genomic Order:  3398
Name:  ? Seita.9G339800 Secondary Identifier:  ? PAC:32687939
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G339800 0.5kb upstream 0.5kb upstream 1298 true scaffold_9: 40007537-40008834 Setaria italica
Seita.9G339800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40008335-40008834 Setaria italica
Seita.9G339800 0.5kb downstream 0.5kb downstream 1298 true scaffold_9: 40007037-40008334 Setaria italica
Seita.9G339800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40007037-40007536 Setaria italica
Seita.9G339800 1.0kb upstream 1.0kb upstream 1798 true scaffold_9: 40007537-40009334 Setaria italica
Seita.9G339800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40008335-40009334 Setaria italica
Seita.9G339800 1.0kb downstream 1.0kb downstream 1798 true scaffold_9: 40006537-40008334 Setaria italica
Seita.9G339800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40006537-40007536 Setaria italica
Seita.9G339800 2.0kb upstream 2.0kb upstream 2798 true scaffold_9: 40007537-40010334 Setaria italica
Seita.9G339800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40008335-40010334 Setaria italica
Seita.9G339800 2.0kb downstream 2.0kb downstream 2798 true scaffold_9: 40005537-40008334 Setaria italica
Seita.9G339800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40005537-40007536 Setaria italica
Seita.9G339800 5.0kb upstream 5.0kb upstream 5798 true scaffold_9: 40007537-40013334 Setaria italica
Seita.9G339800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40008335-40013334 Setaria italica
Seita.9G339800 5.0kb downstream 5.0kb downstream 5798 true scaffold_9: 40002537-40008334 Setaria italica
Seita.9G339800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40002537-40007536 Setaria italica
Seita.9G339800 10.0kb upstream 10.0kb upstream 10798 true scaffold_9: 40007537-40018334 Setaria italica
Seita.9G339800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40008335-40018334 Setaria italica
Seita.9G339800 10.0kb downstream 10.0kb downstream 10798 true scaffold_9: 39997537-40008334 Setaria italica
Seita.9G339800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39997537-40007536 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026261 5273 Angiosperm View MSA
122176990 5267 Panicoideae View MSA
124581667 5269 Grass View MSA
121296251 5274 Embryophyte View MSA
123334448 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.123     Low  
cufflinks 0.053     Low  
cufflinks 0.164        
cufflinks 0.223        
cufflinks 0.163        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.159        
cufflinks 0.149        
cufflinks 0.447        
cufflinks 1.637       High
cufflinks 0.102     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.002       High
cufflinks 0.136        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.707       High
cufflinks 0.026     Low Low
cufflinks 0.367        
cufflinks 0.106        
cufflinks 0.021     Low Low

0 Strain