Gene : Seita.9G449500 S. italica v2.2
Defline:  (1 of 1) PTHR24115:SF525 - ATP BINDING MICROTUBULE MOTOR FAMILY PROTEIN Genomic Order:  4495
Name:  ? Seita.9G449500 Secondary Identifier:  ? PAC:32692209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G449500 0.5kb upstream 0.5kb upstream 7399 true scaffold_9: 49774013-49781411 Setaria italica
Seita.9G449500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 49780912-49781411 Setaria italica
Seita.9G449500 0.5kb downstream 0.5kb downstream 7399 true scaffold_9: 49773513-49780911 Setaria italica
Seita.9G449500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 49773513-49774012 Setaria italica
Seita.9G449500 1.0kb upstream 1.0kb upstream 7899 true scaffold_9: 49774013-49781911 Setaria italica
Seita.9G449500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 49780912-49781911 Setaria italica
Seita.9G449500 1.0kb downstream 1.0kb downstream 7899 true scaffold_9: 49773013-49780911 Setaria italica
Seita.9G449500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 49773013-49774012 Setaria italica
Seita.9G449500 2.0kb upstream 2.0kb upstream 8899 true scaffold_9: 49774013-49782911 Setaria italica
Seita.9G449500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 49780912-49782911 Setaria italica
Seita.9G449500 2.0kb downstream 2.0kb downstream 8899 true scaffold_9: 49772013-49780911 Setaria italica
Seita.9G449500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 49772013-49774012 Setaria italica
Seita.9G449500 5.0kb upstream 5.0kb upstream 11899 true scaffold_9: 49774013-49785911 Setaria italica
Seita.9G449500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 49780912-49785911 Setaria italica
Seita.9G449500 5.0kb downstream 5.0kb downstream 11899 true scaffold_9: 49769013-49780911 Setaria italica
Seita.9G449500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 49769013-49774012 Setaria italica
Seita.9G449500 10.0kb upstream 10.0kb upstream 16899 true scaffold_9: 49774013-49790911 Setaria italica
Seita.9G449500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 49780912-49790911 Setaria italica
Seita.9G449500 10.0kb downstream 10.0kb downstream 16899 true scaffold_9: 49764013-49780911 Setaria italica
Seita.9G449500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 49764013-49774012 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176619 5267 Panicoideae View MSA
124581721 5269 Grass View MSA
122045684 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121310483 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48        
cufflinks 3.539        
cufflinks 0.011     Low Low
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.793        
cufflinks 2.231        
cufflinks 4.696        
cufflinks 1.636        
cufflinks 1.021        
cufflinks 1.957        
cufflinks 1.773        
cufflinks 0.971        
cufflinks 0.013     Low Low
cufflinks 3.046        
cufflinks 0.233        
cufflinks 2.641        
cufflinks 0.063     Low  
cufflinks 0.003     Low Low
cufflinks 2.748        

0 Strain