Gene : Seita.9G457600 S. italica v2.2
Defline:  (1 of 3) PF06127 - Protein of unknown function (DUF962) (DUF962) Genomic Order:  4576
Name:  ? Seita.9G457600 Secondary Identifier:  ? PAC:32689696
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G457600 0.5kb upstream 0.5kb upstream 1464 true scaffold_9: 50427225-50428688 Setaria italica
Seita.9G457600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 50427225-50427724 Setaria italica
Seita.9G457600 0.5kb downstream 0.5kb downstream 1464 true scaffold_9: 50427725-50429188 Setaria italica
Seita.9G457600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 50428689-50429188 Setaria italica
Seita.9G457600 1.0kb upstream 1.0kb upstream 1964 true scaffold_9: 50426725-50428688 Setaria italica
Seita.9G457600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 50426725-50427724 Setaria italica
Seita.9G457600 1.0kb downstream 1.0kb downstream 1964 true scaffold_9: 50427725-50429688 Setaria italica
Seita.9G457600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 50428689-50429688 Setaria italica
Seita.9G457600 2.0kb upstream 2.0kb upstream 2964 true scaffold_9: 50425725-50428688 Setaria italica
Seita.9G457600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 50425725-50427724 Setaria italica
Seita.9G457600 2.0kb downstream 2.0kb downstream 2964 true scaffold_9: 50427725-50430688 Setaria italica
Seita.9G457600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 50428689-50430688 Setaria italica
Seita.9G457600 5.0kb upstream 5.0kb upstream 5964 true scaffold_9: 50422725-50428688 Setaria italica
Seita.9G457600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 50422725-50427724 Setaria italica
Seita.9G457600 5.0kb downstream 5.0kb downstream 5964 true scaffold_9: 50427725-50433688 Setaria italica
Seita.9G457600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 50428689-50433688 Setaria italica
Seita.9G457600 10.0kb upstream 10.0kb upstream 10964 true scaffold_9: 50417725-50428688 Setaria italica
Seita.9G457600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 50417725-50427724 Setaria italica
Seita.9G457600 10.0kb downstream 10.0kb downstream 10964 true scaffold_9: 50427725-50438688 Setaria italica
Seita.9G457600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 50428689-50438688 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184845 5267 Panicoideae View MSA
124589649 5269 Grass View MSA
122044041 5273 Angiosperm View MSA
121350292 5274 Embryophyte View MSA
123424531 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.644        
cufflinks 1.418        
cufflinks 0.883       Low
cufflinks 1.772        
cufflinks 1.063        
cufflinks 1.444        
cufflinks 0.711       Low
cufflinks 1.583        
cufflinks 0.991        
cufflinks 8.175       High
cufflinks 1.814        
cufflinks 2.119        
cufflinks 4.218       High
cufflinks 1.969        
cufflinks 1.171        
cufflinks 1.582        
cufflinks 0.983        
cufflinks 2.961       High
cufflinks 1.144        
cufflinks 2.252        

0 Strain