Gene : Seita.9G464300 S. italica v2.2
Defline:  (1 of 2) KOG3801 - Uncharacterized conserved protein BCN92 Genomic Order:  4643
Name:  ? Seita.9G464300 Secondary Identifier:  ? PAC:32691814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G464300 0.5kb upstream 0.5kb upstream 1320 true scaffold_9: 50891262-50892581 Setaria italica
Seita.9G464300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 50892082-50892581 Setaria italica
Seita.9G464300 0.5kb downstream 0.5kb downstream 1320 true scaffold_9: 50890762-50892081 Setaria italica
Seita.9G464300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 50890762-50891261 Setaria italica
Seita.9G464300 1.0kb upstream 1.0kb upstream 1820 true scaffold_9: 50891262-50893081 Setaria italica
Seita.9G464300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 50892082-50893081 Setaria italica
Seita.9G464300 1.0kb downstream 1.0kb downstream 1820 true scaffold_9: 50890262-50892081 Setaria italica
Seita.9G464300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 50890262-50891261 Setaria italica
Seita.9G464300 2.0kb upstream 2.0kb upstream 2820 true scaffold_9: 50891262-50894081 Setaria italica
Seita.9G464300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 50892082-50894081 Setaria italica
Seita.9G464300 2.0kb downstream 2.0kb downstream 2820 true scaffold_9: 50889262-50892081 Setaria italica
Seita.9G464300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 50889262-50891261 Setaria italica
Seita.9G464300 5.0kb upstream 5.0kb upstream 5820 true scaffold_9: 50891262-50897081 Setaria italica
Seita.9G464300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 50892082-50897081 Setaria italica
Seita.9G464300 5.0kb downstream 5.0kb downstream 5820 true scaffold_9: 50886262-50892081 Setaria italica
Seita.9G464300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 50886262-50891261 Setaria italica
Seita.9G464300 10.0kb upstream 10.0kb upstream 10820 true scaffold_9: 50891262-50902081 Setaria italica
Seita.9G464300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 50892082-50902081 Setaria italica
Seita.9G464300 10.0kb downstream 10.0kb downstream 10820 true scaffold_9: 50881262-50892081 Setaria italica
Seita.9G464300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 50881262-50891261 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185522 5267 Panicoideae View MSA
124575196 5269 Grass View MSA
122044575 5273 Angiosperm View MSA
121346889 5274 Embryophyte View MSA
123426954 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.214        
cufflinks 5.415        
cufflinks 2.338       Low
cufflinks 3.018        
cufflinks 2.576        
cufflinks 5.562        
cufflinks 2.784        
cufflinks 8.614       High
cufflinks 5.164        
cufflinks 17.739     High High
cufflinks 2.391       Low
cufflinks 3.746        
cufflinks 5.089        
cufflinks 6.643        
cufflinks 3.205        
cufflinks 2.781        
cufflinks 6.171        
cufflinks 2.825        
cufflinks 3.109        
cufflinks 6.922        

0 Strain