Gene : Seita.9G472900 S. italica v2.2
Defline:  (1 of 1) KOG0083 - GTPase Rab26/Rab37, small G protein superfamily Genomic Order:  4729
Name:  ? Seita.9G472900 Secondary Identifier:  ? PAC:32692403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G472900 0.5kb upstream 0.5kb upstream 8325 true scaffold_9: 51494526-51502850 Setaria italica
Seita.9G472900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 51502351-51502850 Setaria italica
Seita.9G472900 0.5kb downstream 0.5kb downstream 8325 true scaffold_9: 51494026-51502350 Setaria italica
Seita.9G472900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 51494026-51494525 Setaria italica
Seita.9G472900 1.0kb upstream 1.0kb upstream 8825 true scaffold_9: 51494526-51503350 Setaria italica
Seita.9G472900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 51502351-51503350 Setaria italica
Seita.9G472900 1.0kb downstream 1.0kb downstream 8825 true scaffold_9: 51493526-51502350 Setaria italica
Seita.9G472900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 51493526-51494525 Setaria italica
Seita.9G472900 2.0kb upstream 2.0kb upstream 9825 true scaffold_9: 51494526-51504350 Setaria italica
Seita.9G472900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 51502351-51504350 Setaria italica
Seita.9G472900 2.0kb downstream 2.0kb downstream 9825 true scaffold_9: 51492526-51502350 Setaria italica
Seita.9G472900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 51492526-51494525 Setaria italica
Seita.9G472900 5.0kb upstream 5.0kb upstream 12825 true scaffold_9: 51494526-51507350 Setaria italica
Seita.9G472900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 51502351-51507350 Setaria italica
Seita.9G472900 5.0kb downstream 5.0kb downstream 12825 true scaffold_9: 51489526-51502350 Setaria italica
Seita.9G472900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 51489526-51494525 Setaria italica
Seita.9G472900 10.0kb upstream 10.0kb upstream 17825 true scaffold_9: 51494526-51512350 Setaria italica
Seita.9G472900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 51502351-51512350 Setaria italica
Seita.9G472900 10.0kb downstream 10.0kb downstream 17825 true scaffold_9: 51484526-51502350 Setaria italica
Seita.9G472900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 51484526-51494525 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187196 5267 Panicoideae View MSA
124572863 5269 Grass View MSA
122044978 5273 Angiosperm View MSA
121310378 5274 Embryophyte View MSA
123427949 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.816        
cufflinks 1.602       High
cufflinks 0.26       Low
cufflinks 0.299       Low
cufflinks 0.519        
cufflinks 1.311       High
cufflinks 1.028        
cufflinks 0.997        
cufflinks 0.929        
cufflinks 1.116        
cufflinks 0.894        
cufflinks 0.767        
cufflinks 0.701        
cufflinks 0.375       Low
cufflinks 0.677        
cufflinks 0.506        
cufflinks 0.701        
cufflinks 0.406        
cufflinks 0.229       Low
cufflinks 0.834        

0 Strain