Gene : Seita.9G412000 S. italica v2.2
Defline:  (1 of 1) PTHR30540:SF6 - POTASSIUM TRANSPORTER 2 Genomic Order:  4120
Name:  ? Seita.9G412000 Secondary Identifier:  ? PAC:32689810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G412000 0.5kb upstream 0.5kb upstream 6963 true scaffold_9: 46973981-46980943 Setaria italica
Seita.9G412000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 46980444-46980943 Setaria italica
Seita.9G412000 0.5kb downstream 0.5kb downstream 6963 true scaffold_9: 46973481-46980443 Setaria italica
Seita.9G412000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 46973481-46973980 Setaria italica
Seita.9G412000 1.0kb upstream 1.0kb upstream 7463 true scaffold_9: 46973981-46981443 Setaria italica
Seita.9G412000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 46980444-46981443 Setaria italica
Seita.9G412000 1.0kb downstream 1.0kb downstream 7463 true scaffold_9: 46972981-46980443 Setaria italica
Seita.9G412000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 46972981-46973980 Setaria italica
Seita.9G412000 2.0kb upstream 2.0kb upstream 8463 true scaffold_9: 46973981-46982443 Setaria italica
Seita.9G412000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 46980444-46982443 Setaria italica
Seita.9G412000 2.0kb downstream 2.0kb downstream 8463 true scaffold_9: 46971981-46980443 Setaria italica
Seita.9G412000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 46971981-46973980 Setaria italica
Seita.9G412000 5.0kb upstream 5.0kb upstream 11463 true scaffold_9: 46973981-46985443 Setaria italica
Seita.9G412000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 46980444-46985443 Setaria italica
Seita.9G412000 5.0kb downstream 5.0kb downstream 11463 true scaffold_9: 46968981-46980443 Setaria italica
Seita.9G412000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 46968981-46973980 Setaria italica
Seita.9G412000 10.0kb upstream 10.0kb upstream 16463 true scaffold_9: 46973981-46990443 Setaria italica
Seita.9G412000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 46980444-46990443 Setaria italica
Seita.9G412000 10.0kb downstream 10.0kb downstream 16463 true scaffold_9: 46963981-46980443 Setaria italica
Seita.9G412000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 46963981-46973980 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195412 5267 Panicoideae View MSA
124573780 5269 Grass View MSA
122045012 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121310386 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.927       High
cufflinks 6.574       High
cufflinks 1.706        
cufflinks 1.351        
cufflinks 2.295        
cufflinks 6.068       High
cufflinks 6.131       High
cufflinks 2.546        
cufflinks 3.8        
cufflinks 2.975        
cufflinks 6.803       High
cufflinks 0.455       Low
cufflinks 0.988        
cufflinks 0.836       Low
cufflinks 0.716       Low
cufflinks 4.368        
cufflinks 0.606       Low
cufflinks 1.535        
cufflinks 1.679        
cufflinks 0.878        

0 Strain