Gene : Seita.9G415300 S. italica v2.2
Defline:  (1 of 1) PTHR24221:SF18 - ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 6, MITOCHONDRIAL Genomic Order:  4153
Name:  ? Seita.9G415300 Secondary Identifier:  ? PAC:32689269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G415300 0.5kb upstream 0.5kb upstream 9724 true scaffold_9: 47235727-47245450 Setaria italica
Seita.9G415300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 47244951-47245450 Setaria italica
Seita.9G415300 0.5kb downstream 0.5kb downstream 9724 true scaffold_9: 47235227-47244950 Setaria italica
Seita.9G415300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 47235227-47235726 Setaria italica
Seita.9G415300 1.0kb upstream 1.0kb upstream 10224 true scaffold_9: 47235727-47245950 Setaria italica
Seita.9G415300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 47244951-47245950 Setaria italica
Seita.9G415300 1.0kb downstream 1.0kb downstream 10224 true scaffold_9: 47234727-47244950 Setaria italica
Seita.9G415300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 47234727-47235726 Setaria italica
Seita.9G415300 2.0kb upstream 2.0kb upstream 11224 true scaffold_9: 47235727-47246950 Setaria italica
Seita.9G415300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 47244951-47246950 Setaria italica
Seita.9G415300 2.0kb downstream 2.0kb downstream 11224 true scaffold_9: 47233727-47244950 Setaria italica
Seita.9G415300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 47233727-47235726 Setaria italica
Seita.9G415300 5.0kb upstream 5.0kb upstream 14224 true scaffold_9: 47235727-47249950 Setaria italica
Seita.9G415300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 47244951-47249950 Setaria italica
Seita.9G415300 5.0kb downstream 5.0kb downstream 14224 true scaffold_9: 47230727-47244950 Setaria italica
Seita.9G415300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 47230727-47235726 Setaria italica
Seita.9G415300 10.0kb upstream 10.0kb upstream 19224 true scaffold_9: 47235727-47254950 Setaria italica
Seita.9G415300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 47244951-47254950 Setaria italica
Seita.9G415300 10.0kb downstream 10.0kb downstream 19224 true scaffold_9: 47225727-47244950 Setaria italica
Seita.9G415300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 47225727-47235726 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041097 5273 Angiosperm View MSA
122185143 5267 Panicoideae View MSA
124572213 5269 Grass View MSA
121345218 5274 Embryophyte View MSA
123424438 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.647       High
cufflinks 5.275       Low
cufflinks 8.99        
cufflinks 9.953        
cufflinks 9.759        
cufflinks 4.695       Low
cufflinks 5.953       Low
cufflinks 8.72        
cufflinks 7.142        
cufflinks 7.69        
cufflinks 8.493        
cufflinks 10.249        
cufflinks 7.513        
cufflinks 9.014        
cufflinks 8.892        
cufflinks 9.882        
cufflinks 10.569        
cufflinks 11.989     High High
cufflinks 8.195        
cufflinks 6.433       Low

0 Strain