Gene : Seita.9G545100 S. italica v2.2
Defline:  (1 of 2) PTHR11661:SF1 - 39S RIBOSOMAL PROTEIN L11, MITOCHONDRIAL Genomic Order:  5451
Name:  ? Seita.9G545100 Secondary Identifier:  ? PAC:32693241
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G545100 0.5kb upstream 0.5kb upstream 2794 true scaffold_9: 56560899-56563692 Setaria italica
Seita.9G545100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 56560899-56561398 Setaria italica
Seita.9G545100 0.5kb downstream 0.5kb downstream 2794 true scaffold_9: 56561399-56564192 Setaria italica
Seita.9G545100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 56563693-56564192 Setaria italica
Seita.9G545100 1.0kb upstream 1.0kb upstream 3294 true scaffold_9: 56560399-56563692 Setaria italica
Seita.9G545100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 56560399-56561398 Setaria italica
Seita.9G545100 1.0kb downstream 1.0kb downstream 3294 true scaffold_9: 56561399-56564692 Setaria italica
Seita.9G545100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 56563693-56564692 Setaria italica
Seita.9G545100 2.0kb upstream 2.0kb upstream 4294 true scaffold_9: 56559399-56563692 Setaria italica
Seita.9G545100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 56559399-56561398 Setaria italica
Seita.9G545100 2.0kb downstream 2.0kb downstream 4294 true scaffold_9: 56561399-56565692 Setaria italica
Seita.9G545100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 56563693-56565692 Setaria italica
Seita.9G545100 5.0kb upstream 5.0kb upstream 7294 true scaffold_9: 56556399-56563692 Setaria italica
Seita.9G545100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 56556399-56561398 Setaria italica
Seita.9G545100 5.0kb downstream 5.0kb downstream 7294 true scaffold_9: 56561399-56568692 Setaria italica
Seita.9G545100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 56563693-56568692 Setaria italica
Seita.9G545100 10.0kb upstream 10.0kb upstream 12294 true scaffold_9: 56551399-56563692 Setaria italica
Seita.9G545100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 56551399-56561398 Setaria italica
Seita.9G545100 10.0kb downstream 10.0kb downstream 12294 true scaffold_9: 56561399-56573692 Setaria italica
Seita.9G545100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 56563693-56573692 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027971 5273 Angiosperm View MSA
122116961 5267 Panicoideae View MSA
124587008 5269 Grass View MSA
121346604 5274 Embryophyte View MSA
123425186 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.402        
cufflinks 0.699        
cufflinks 0.075     Low Low
cufflinks 0.034     Low Low
cufflinks 0.049     Low Low
cufflinks 0.755        
cufflinks 0.274        
cufflinks 0.795        
cufflinks 0.47        
cufflinks 1.53       High
cufflinks 0.679        
cufflinks 0.64        
cufflinks 0.391        
cufflinks 0.184        
cufflinks 1.056        
cufflinks 0.062     Low Low
cufflinks 1.289       High
cufflinks 0.066     Low Low
cufflinks 0.128        
cufflinks 1.212       High

0 Strain