Gene : Seita.9G552200 S. italica v2.2
Defline:  (1 of 1) PTHR34573:SF1 - THIOL-DISULFIDE OXIDOREDUCTASE LTO1 Genomic Order:  5522
Name:  ? Seita.9G552200 Secondary Identifier:  ? PAC:32689410
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G552200 0.5kb upstream 0.5kb upstream 3253 true scaffold_9: 56997443-57000695 Setaria italica
Seita.9G552200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 57000196-57000695 Setaria italica
Seita.9G552200 0.5kb downstream 0.5kb downstream 3253 true scaffold_9: 56996943-57000195 Setaria italica
Seita.9G552200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 56996943-56997442 Setaria italica
Seita.9G552200 1.0kb upstream 1.0kb upstream 3753 true scaffold_9: 56997443-57001195 Setaria italica
Seita.9G552200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 57000196-57001195 Setaria italica
Seita.9G552200 1.0kb downstream 1.0kb downstream 3753 true scaffold_9: 56996443-57000195 Setaria italica
Seita.9G552200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 56996443-56997442 Setaria italica
Seita.9G552200 2.0kb upstream 2.0kb upstream 4753 true scaffold_9: 56997443-57002195 Setaria italica
Seita.9G552200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 57000196-57002195 Setaria italica
Seita.9G552200 2.0kb downstream 2.0kb downstream 4753 true scaffold_9: 56995443-57000195 Setaria italica
Seita.9G552200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 56995443-56997442 Setaria italica
Seita.9G552200 5.0kb upstream 5.0kb upstream 7753 true scaffold_9: 56997443-57005195 Setaria italica
Seita.9G552200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 57000196-57005195 Setaria italica
Seita.9G552200 5.0kb downstream 5.0kb downstream 7753 true scaffold_9: 56992443-57000195 Setaria italica
Seita.9G552200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 56992443-56997442 Setaria italica
Seita.9G552200 10.0kb upstream 10.0kb upstream 12753 true scaffold_9: 56997443-57010195 Setaria italica
Seita.9G552200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 57000196-57010195 Setaria italica
Seita.9G552200 10.0kb downstream 10.0kb downstream 12753 true scaffold_9: 56987443-57000195 Setaria italica
Seita.9G552200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 56987443-56997442 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178500 5267 Panicoideae View MSA
124579724 5269 Grass View MSA
122046351 5273 Angiosperm View MSA
121343907 5274 Embryophyte View MSA
123424109 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.894        
cufflinks 6.63        
cufflinks 8.311        
cufflinks 5.378        
cufflinks 8.841        
cufflinks 5.882        
cufflinks 12.843       High
cufflinks 12.994       High
cufflinks 14.448     High High
cufflinks 3.428        
cufflinks 4.04        
cufflinks 2.02       Low
cufflinks 1.771       Low
cufflinks 9.483        
cufflinks 2.791       Low
cufflinks 15.499     High High
cufflinks 2.838       Low
cufflinks 4.894        
cufflinks 14.15     High High
cufflinks 3.04        

0 Strain