Gene : Seita.9G490700 S. italica v2.2
Genomic Order:  4907 Name:  ? Seita.9G490700
Secondary Identifier:  ? PAC:32692771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G490700 0.5kb upstream 0.5kb upstream 6120 true scaffold_9: 52929748-52935867 Setaria italica
Seita.9G490700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 52929748-52930247 Setaria italica
Seita.9G490700 0.5kb downstream 0.5kb downstream 6120 true scaffold_9: 52930248-52936367 Setaria italica
Seita.9G490700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 52935868-52936367 Setaria italica
Seita.9G490700 1.0kb upstream 1.0kb upstream 6620 true scaffold_9: 52929248-52935867 Setaria italica
Seita.9G490700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 52929248-52930247 Setaria italica
Seita.9G490700 1.0kb downstream 1.0kb downstream 6620 true scaffold_9: 52930248-52936867 Setaria italica
Seita.9G490700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 52935868-52936867 Setaria italica
Seita.9G490700 2.0kb upstream 2.0kb upstream 7620 true scaffold_9: 52928248-52935867 Setaria italica
Seita.9G490700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 52928248-52930247 Setaria italica
Seita.9G490700 2.0kb downstream 2.0kb downstream 7620 true scaffold_9: 52930248-52937867 Setaria italica
Seita.9G490700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 52935868-52937867 Setaria italica
Seita.9G490700 5.0kb upstream 5.0kb upstream 10620 true scaffold_9: 52925248-52935867 Setaria italica
Seita.9G490700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 52925248-52930247 Setaria italica
Seita.9G490700 5.0kb downstream 5.0kb downstream 10620 true scaffold_9: 52930248-52940867 Setaria italica
Seita.9G490700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 52935868-52940867 Setaria italica
Seita.9G490700 10.0kb upstream 10.0kb upstream 15620 true scaffold_9: 52920248-52935867 Setaria italica
Seita.9G490700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 52920248-52930247 Setaria italica
Seita.9G490700 10.0kb downstream 10.0kb downstream 15620 true scaffold_9: 52930248-52945867 Setaria italica
Seita.9G490700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 52935868-52945867 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178563 5267 Panicoideae View MSA
124583749 5269 Grass View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.223        
cufflinks 7.544       High
cufflinks 5.28        
cufflinks 3.972       Low
cufflinks 4.171       Low
cufflinks 7.03       High
cufflinks 6.06        
cufflinks 4.772        
cufflinks 4.63        
cufflinks 4.895        
cufflinks 5.867        
cufflinks 4.896        
cufflinks 3.731       Low
cufflinks 4.619        
cufflinks 6.531       High
cufflinks 6.299        
cufflinks 4.476        
cufflinks 7.482       High
cufflinks 4.521        
cufflinks 4.969        

0 Strain