Gene : Seita.9G503500 S. italica v2.2
Defline:  (1 of 2) PTHR12829 - N6-ADENOSINE-METHYLTRANSFERASE Genomic Order:  5035
Name:  ? Seita.9G503500 Secondary Identifier:  ? PAC:32692980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G503500 0.5kb upstream 0.5kb upstream 3483 true scaffold_9: 53746238-53749720 Setaria italica
Seita.9G503500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 53746238-53746737 Setaria italica
Seita.9G503500 0.5kb downstream 0.5kb downstream 3483 true scaffold_9: 53746738-53750220 Setaria italica
Seita.9G503500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 53749721-53750220 Setaria italica
Seita.9G503500 1.0kb upstream 1.0kb upstream 3983 true scaffold_9: 53745738-53749720 Setaria italica
Seita.9G503500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 53745738-53746737 Setaria italica
Seita.9G503500 1.0kb downstream 1.0kb downstream 3983 true scaffold_9: 53746738-53750720 Setaria italica
Seita.9G503500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 53749721-53750720 Setaria italica
Seita.9G503500 2.0kb upstream 2.0kb upstream 4983 true scaffold_9: 53744738-53749720 Setaria italica
Seita.9G503500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 53744738-53746737 Setaria italica
Seita.9G503500 2.0kb downstream 2.0kb downstream 4983 true scaffold_9: 53746738-53751720 Setaria italica
Seita.9G503500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 53749721-53751720 Setaria italica
Seita.9G503500 5.0kb upstream 5.0kb upstream 7983 true scaffold_9: 53741738-53749720 Setaria italica
Seita.9G503500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 53741738-53746737 Setaria italica
Seita.9G503500 5.0kb downstream 5.0kb downstream 7983 true scaffold_9: 53746738-53754720 Setaria italica
Seita.9G503500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 53749721-53754720 Setaria italica
Seita.9G503500 10.0kb upstream 10.0kb upstream 12983 true scaffold_9: 53736738-53749720 Setaria italica
Seita.9G503500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 53736738-53746737 Setaria italica
Seita.9G503500 10.0kb downstream 10.0kb downstream 12983 true scaffold_9: 53746738-53759720 Setaria italica
Seita.9G503500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 53749721-53759720 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041346 5273 Angiosperm View MSA
122178612 5267 Panicoideae View MSA
124572001 5269 Grass View MSA
121344904 5274 Embryophyte View MSA
123380126 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.759       High
cufflinks 2.393        
cufflinks 1.653        
cufflinks 1.544        
cufflinks 1.799        
cufflinks 2.101        
cufflinks 1.676        
cufflinks 1.703        
cufflinks 2.149        
cufflinks 2.998        
cufflinks 2.454        
cufflinks 2.054        
cufflinks 1.902        
cufflinks 1.245       Low
cufflinks 1.803        
cufflinks 3.902       High
cufflinks 2.51        
cufflinks 5.17       High
cufflinks 0.957       Low
cufflinks 1.728        

0 Strain