Gene : Seita.9G564700 S. italica v2.2
Defline:  (1 of 1) PTHR10869:SF80 - IRON ION BINDING / OXIDOREDUCTASE Genomic Order:  5647
Name:  ? Seita.9G564700 Secondary Identifier:  ? PAC:32687954
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G564700 0.5kb upstream 0.5kb upstream 2415 true scaffold_9: 57839061-57841475 Setaria italica
Seita.9G564700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 57839061-57839560 Setaria italica
Seita.9G564700 0.5kb downstream 0.5kb downstream 2415 true scaffold_9: 57839561-57841975 Setaria italica
Seita.9G564700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 57841476-57841975 Setaria italica
Seita.9G564700 1.0kb upstream 1.0kb upstream 2915 true scaffold_9: 57838561-57841475 Setaria italica
Seita.9G564700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 57838561-57839560 Setaria italica
Seita.9G564700 1.0kb downstream 1.0kb downstream 2915 true scaffold_9: 57839561-57842475 Setaria italica
Seita.9G564700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 57841476-57842475 Setaria italica
Seita.9G564700 2.0kb upstream 2.0kb upstream 3915 true scaffold_9: 57837561-57841475 Setaria italica
Seita.9G564700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 57837561-57839560 Setaria italica
Seita.9G564700 2.0kb downstream 2.0kb downstream 3915 true scaffold_9: 57839561-57843475 Setaria italica
Seita.9G564700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 57841476-57843475 Setaria italica
Seita.9G564700 5.0kb upstream 5.0kb upstream 6915 true scaffold_9: 57834561-57841475 Setaria italica
Seita.9G564700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 57834561-57839560 Setaria italica
Seita.9G564700 5.0kb downstream 5.0kb downstream 6915 true scaffold_9: 57839561-57846475 Setaria italica
Seita.9G564700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 57841476-57846475 Setaria italica
Seita.9G564700 10.0kb upstream 10.0kb upstream 11915 true scaffold_9: 57829561-57841475 Setaria italica
Seita.9G564700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 57829561-57839560 Setaria italica
Seita.9G564700 10.0kb downstream 10.0kb downstream 11915 true scaffold_9: 57839561-57851475 Setaria italica
Seita.9G564700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 57841476-57851475 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188650 5267 Panicoideae View MSA
124578540 5269 Grass View MSA
122042956 5273 Angiosperm View MSA
121350444 5274 Embryophyte View MSA
123425265 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.765        
cufflinks 11.345        
cufflinks 5.7        
cufflinks 4.916       Low
cufflinks 4.359       Low
cufflinks 11.812        
cufflinks 5.506        
cufflinks 9.403        
cufflinks 6.679        
cufflinks 9.952        
cufflinks 9.195        
cufflinks 11.76        
cufflinks 10.928        
cufflinks 7.484        
cufflinks 13.809       High
cufflinks 4.157       Low
cufflinks 17.407     High High
cufflinks 4.445       Low
cufflinks 6.047        
cufflinks 13.506       High

0 Strain