Gene : PIL2 A. thaliana TAIR10
Primary Identifier:  ? AT3G62090 Defline:  (1 of 2) PTHR12565:SF3 - FI24210P1
Genomic Order:  5286 Name:  ? AT3G62090
Secondary Identifier:  ? PAC:19664283
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62090 0.5kb upstream 0.5kb upstream 2663 true Chr3: 22988547-22991209 Arabidopsis thaliana
AT3G62090 0.5kb upstream 0.5kb upstream 500 false Chr3: 22990710-22991209 Arabidopsis thaliana
AT3G62090 0.5kb downstream 0.5kb downstream 2663 true Chr3: 22988047-22990709 Arabidopsis thaliana
AT3G62090 0.5kb downstream 0.5kb downstream 500 false Chr3: 22988047-22988546 Arabidopsis thaliana
AT3G62090 1.0kb upstream 1.0kb upstream 3163 true Chr3: 22988547-22991709 Arabidopsis thaliana
AT3G62090 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22990710-22991709 Arabidopsis thaliana
AT3G62090 1.0kb downstream 1.0kb downstream 3163 true Chr3: 22987547-22990709 Arabidopsis thaliana
AT3G62090 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22987547-22988546 Arabidopsis thaliana
AT3G62090 2.0kb upstream 2.0kb upstream 4163 true Chr3: 22988547-22992709 Arabidopsis thaliana
AT3G62090 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22990710-22992709 Arabidopsis thaliana
AT3G62090 2.0kb downstream 2.0kb downstream 4163 true Chr3: 22986547-22990709 Arabidopsis thaliana
AT3G62090 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22986547-22988546 Arabidopsis thaliana
AT3G62090 5.0kb upstream 5.0kb upstream 7163 true Chr3: 22988547-22995709 Arabidopsis thaliana
AT3G62090 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22990710-22995709 Arabidopsis thaliana
AT3G62090 5.0kb downstream 5.0kb downstream 7163 true Chr3: 22983547-22990709 Arabidopsis thaliana
AT3G62090 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22983547-22988546 Arabidopsis thaliana
AT3G62090 10.0kb upstream 10.0kb upstream 12163 true Chr3: 22988547-23000709 Arabidopsis thaliana
AT3G62090 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22990710-23000709 Arabidopsis thaliana
AT3G62090 10.0kb downstream 10.0kb downstream 12163 true Chr3: 22978547-22990709 Arabidopsis thaliana
AT3G62090 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22978547-22988546 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510482 5273 Angiosperm View MSA
122364509 5261 Brassicaceae View MSA
123798765 5264 Brassicales-Malvales View MSA
124296360 5266 SBM View MSA
124148534 5268 Malvidae View MSA
123874510 5270 Rosid View MSA
123458469 5271 Pentapetalae View MSA
122493874 5272 Eudicot View MSA
120783579 5274 Embryophyte View MSA
122825576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.743        
cufflinks 3.48        
cufflinks 0.49       Low
cufflinks 5.212       High
cufflinks 0.552        
cufflinks 3.877        

0 Strain