Gene : GLP10 A. thaliana TAIR10
Primary Identifier:  ? AT3G62020 Defline:  (1 of 2) PTHR31238//PTHR31238:SF18 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2-RELATED
Genomic Order:  5279 Name:  ? AT3G62020
Secondary Identifier:  ? PAC:19664138
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62020 0.5kb upstream 0.5kb upstream 1411 true Chr3: 22971358-22972768 Arabidopsis thaliana
AT3G62020 0.5kb upstream 0.5kb upstream 500 false Chr3: 22972269-22972768 Arabidopsis thaliana
AT3G62020 0.5kb downstream 0.5kb downstream 1411 true Chr3: 22970858-22972268 Arabidopsis thaliana
AT3G62020 0.5kb downstream 0.5kb downstream 500 false Chr3: 22970858-22971357 Arabidopsis thaliana
AT3G62020 1.0kb upstream 1.0kb upstream 1911 true Chr3: 22971358-22973268 Arabidopsis thaliana
AT3G62020 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22972269-22973268 Arabidopsis thaliana
AT3G62020 1.0kb downstream 1.0kb downstream 1911 true Chr3: 22970358-22972268 Arabidopsis thaliana
AT3G62020 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22970358-22971357 Arabidopsis thaliana
AT3G62020 2.0kb upstream 2.0kb upstream 2911 true Chr3: 22971358-22974268 Arabidopsis thaliana
AT3G62020 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22972269-22974268 Arabidopsis thaliana
AT3G62020 2.0kb downstream 2.0kb downstream 2911 true Chr3: 22969358-22972268 Arabidopsis thaliana
AT3G62020 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22969358-22971357 Arabidopsis thaliana
AT3G62020 5.0kb upstream 5.0kb upstream 5911 true Chr3: 22971358-22977268 Arabidopsis thaliana
AT3G62020 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22972269-22977268 Arabidopsis thaliana
AT3G62020 5.0kb downstream 5.0kb downstream 5911 true Chr3: 22966358-22972268 Arabidopsis thaliana
AT3G62020 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22966358-22971357 Arabidopsis thaliana
AT3G62020 10.0kb upstream 10.0kb upstream 10911 true Chr3: 22971358-22982268 Arabidopsis thaliana
AT3G62020 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22972269-22982268 Arabidopsis thaliana
AT3G62020 10.0kb downstream 10.0kb downstream 10911 true Chr3: 22961358-22972268 Arabidopsis thaliana
AT3G62020 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22961358-22971357 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041466 5273 Angiosperm View MSA
122362350 5261 Brassicaceae View MSA
123840026 5264 Brassicales-Malvales View MSA
124343643 5266 SBM View MSA
124244978 5268 Malvidae View MSA
124073822 5270 Rosid View MSA
123750442 5271 Pentapetalae View MSA
122795274 5272 Eudicot View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.644        
cufflinks 6.176        
cufflinks 1.763        
cufflinks 9.751        
cufflinks 1.558       Low
cufflinks 17.013       High

0 Strain