Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-1081 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT3G60730 0.5kb upstream | 0.5kb | upstream | 2884 | true | Chr3: 22444390-22447273 | Arabidopsis thaliana |
AT3G60730 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr3: 22444390-22444889 | Arabidopsis thaliana |
AT3G60730 0.5kb downstream | 0.5kb | downstream | 2884 | true | Chr3: 22444890-22447773 | Arabidopsis thaliana |
AT3G60730 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr3: 22447274-22447773 | Arabidopsis thaliana |
AT3G60730 1.0kb upstream | 1.0kb | upstream | 3384 | true | Chr3: 22443890-22447273 | Arabidopsis thaliana |
AT3G60730 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr3: 22443890-22444889 | Arabidopsis thaliana |
AT3G60730 1.0kb downstream | 1.0kb | downstream | 3384 | true | Chr3: 22444890-22448273 | Arabidopsis thaliana |
AT3G60730 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr3: 22447274-22448273 | Arabidopsis thaliana |
AT3G60730 2.0kb upstream | 2.0kb | upstream | 4384 | true | Chr3: 22442890-22447273 | Arabidopsis thaliana |
AT3G60730 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr3: 22442890-22444889 | Arabidopsis thaliana |
AT3G60730 2.0kb downstream | 2.0kb | downstream | 4384 | true | Chr3: 22444890-22449273 | Arabidopsis thaliana |
AT3G60730 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr3: 22447274-22449273 | Arabidopsis thaliana |
AT3G60730 5.0kb upstream | 5.0kb | upstream | 7384 | true | Chr3: 22439890-22447273 | Arabidopsis thaliana |
AT3G60730 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr3: 22439890-22444889 | Arabidopsis thaliana |
AT3G60730 5.0kb downstream | 5.0kb | downstream | 7384 | true | Chr3: 22444890-22452273 | Arabidopsis thaliana |
AT3G60730 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr3: 22447274-22452273 | Arabidopsis thaliana |
AT3G60730 10.0kb upstream | 10.0kb | upstream | 12384 | true | Chr3: 22434890-22447273 | Arabidopsis thaliana |
AT3G60730 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr3: 22434890-22444889 | Arabidopsis thaliana |
AT3G60730 10.0kb downstream | 10.0kb | downstream | 12384 | true | Chr3: 22444890-22457273 | Arabidopsis thaliana |
AT3G60730 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr3: 22447274-22457273 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122367115 | 5261 | Brassicaceae | View MSA |
123829161 | 5264 | Brassicales-Malvales | View MSA |
124350444 | 5266 | SBM | View MSA |
124244042 | 5268 | Malvidae | View MSA |
124073271 | 5270 | Rosid | View MSA |
123752785 | 5271 | Pentapetalae | View MSA |
122796250 | 5272 | Eudicot | View MSA |
122050958 | 5273 | Angiosperm | View MSA |
121350573 | 5274 | Embryophyte | View MSA |
123381802 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed |