Gene : AT3G60670 A. thaliana TAIR10
Defline:  (1 of 12) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  5124
Name:  ? AT3G60670 Secondary Identifier:  ? PAC:19660861
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G60670 0.5kb upstream 0.5kb upstream 2277 true Chr3: 22424512-22426788 Arabidopsis thaliana
AT3G60670 0.5kb upstream 0.5kb upstream 500 false Chr3: 22426289-22426788 Arabidopsis thaliana
AT3G60670 0.5kb downstream 0.5kb downstream 2277 true Chr3: 22424012-22426288 Arabidopsis thaliana
AT3G60670 0.5kb downstream 0.5kb downstream 500 false Chr3: 22424012-22424511 Arabidopsis thaliana
AT3G60670 1.0kb upstream 1.0kb upstream 2777 true Chr3: 22424512-22427288 Arabidopsis thaliana
AT3G60670 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22426289-22427288 Arabidopsis thaliana
AT3G60670 1.0kb downstream 1.0kb downstream 2777 true Chr3: 22423512-22426288 Arabidopsis thaliana
AT3G60670 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22423512-22424511 Arabidopsis thaliana
AT3G60670 2.0kb upstream 2.0kb upstream 3777 true Chr3: 22424512-22428288 Arabidopsis thaliana
AT3G60670 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22426289-22428288 Arabidopsis thaliana
AT3G60670 2.0kb downstream 2.0kb downstream 3777 true Chr3: 22422512-22426288 Arabidopsis thaliana
AT3G60670 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22422512-22424511 Arabidopsis thaliana
AT3G60670 5.0kb upstream 5.0kb upstream 6777 true Chr3: 22424512-22431288 Arabidopsis thaliana
AT3G60670 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22426289-22431288 Arabidopsis thaliana
AT3G60670 5.0kb downstream 5.0kb downstream 6777 true Chr3: 22419512-22426288 Arabidopsis thaliana
AT3G60670 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22419512-22424511 Arabidopsis thaliana
AT3G60670 10.0kb upstream 10.0kb upstream 11777 true Chr3: 22424512-22436288 Arabidopsis thaliana
AT3G60670 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22426289-22436288 Arabidopsis thaliana
AT3G60670 10.0kb downstream 10.0kb downstream 11777 true Chr3: 22414512-22426288 Arabidopsis thaliana
AT3G60670 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22414512-22424511 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368964 5261 Brassicaceae View MSA
123835234 5264 Brassicales-Malvales View MSA
124343314 5266 SBM View MSA
124253522 5268 Malvidae View MSA
124069177 5270 Rosid View MSA
123750215 5271 Pentapetalae View MSA
122789413 5272 Eudicot View MSA
122043598 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.483        
cufflinks 0.512        
cufflinks 0.333        
cufflinks 1.154       High
cufflinks 0.963        
cufflinks 0.149     Low Low

0 Strain